Difference between revisions of "TSS:Hg 103284.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=8 | |distance_to_tss=8 | ||
|end=137028286 | |end=137028286 | ||
| + | |end_of_center_position=137028281 | ||
|entrez_id=20 | |entrez_id=20 | ||
|gc_percent=0.860697 | |gc_percent=0.860697 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=137028274 | |start=137028274 | ||
| + | |start_of_center_position=137028280 | ||
|strand=- | |strand=- | ||
|tata_box="-65(GCGCCTTTAAGC,-,0.00),-63(GCCTTTAAGCGG,+,0.00)" | |tata_box="-65(GCGCCTTTAAGC,-,0.00),-63(GCCTTTAAGCGG,+,0.00)" | ||
Revision as of 16:02, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 137028280 |
|---|---|
| End of the center position in the TSS region: | 137028281 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000371605.7 ENST00000265662.9 NM_001606 uc064xhg.1 uc011mem.1 |
|---|---|
| Distance: | -2 |
| Num_trans: | 20 |
| All_trans: | ENST00000371605.7:-2 ENST00000265662.9:-2 NM_001606:-2 uc064xhg.1:-2 uc011mem.1:-2 ENST00000341511.10:85 uc064xhf.1:85 AF178941:85 ENST00000494046.5:91 uc064xhx.1:91 AK308738:91 ENST00000464876.5:97 uc064xhw.1:97 BC090860:97 BC064542:99 ENST00000492260.5:104 uc064xht.1:104 BC029282:104 AF327657:129 AB384556:131 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NM_001606 |
| Entrez ID: | 20 |
| Nearest Unigene: | Hs.421202 |
| Nearest Refseq: | NM_001606 |
| Nearest Ensembl: | ENSG00000107331 |
| Gene Name: | ATP binding cassette subfamily A member 2 |
| Gene Alias: | ABC2 |
| Gene Description: | ATP binding cassette subfamily A member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.21 |
| GC%: | 0.860697 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-65(GCGCCTTTAAGC,-,0.00),-63(GCCTTTAAGCGG,+,0.00)" |
