Difference between revisions of "TSS:Hg 103285.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=-24 | |distance_to_tss=-24 | ||
|end=137028317 | |end=137028317 | ||
| + | |end_of_center_position=137028312 | ||
|entrez_id=20 | |entrez_id=20 | ||
|gc_percent=0.870647 | |gc_percent=0.870647 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=137028306 | |start=137028306 | ||
| + | |start_of_center_position=137028311 | ||
|strand=- | |strand=- | ||
|tata_box="-33(GCGCCTTTAAGC,-,0.00),-31(GCCTTTAAGCGG,+,0.00)" | |tata_box="-33(GCGCCTTTAAGC,-,0.00),-31(GCCTTTAAGCGG,+,0.00)" | ||
Revision as of 16:02, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 137028311 |
|---|---|
| End of the center position in the TSS region: | 137028312 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000371605.7 ENST00000265662.9 NM_001606 uc064xhg.1 uc011mem.1 |
|---|---|
| Distance: | 19 |
| Num_trans: | 22 |
| All_trans: | ENST00000371605.7:19 ENST00000265662.9:19 NM_001606:19 uc064xhg.1:19 uc011mem.1:19 ENST00000341511.10:117 uc064xhf.1:117 AF178941:117 ENST00000494046.5:123 uc064xhx.1:123 AK308738:123 ENST00000464876.5:129 uc064xhw.1:129 BC090860:129 BC064542:131 ENST00000492260.5:136 uc064xht.1:136 BC029282:136 AF327657:161 AB384556:163 ENST00000425423.1:-490 uc064xib.1:-490 |
TATA-Box annotation
| Distance to TSS: | -24 |
|---|---|
| Nearest PromoterID: | NM_001606 |
| Entrez ID: | 20 |
| Nearest Unigene: | Hs.421202 |
| Nearest Refseq: | NM_001606 |
| Nearest Ensembl: | ENSG00000107331 |
| Gene Name: | ATP binding cassette subfamily A member 2 |
| Gene Alias: | ABC2 |
| Gene Description: | ATP binding cassette subfamily A member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.22 |
| GC%: | 0.870647 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-33(GCGCCTTTAAGC,-,0.00),-31(GCCTTTAAGCGG,+,0.00)" |
