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Difference between revisions of "TSS:Hg 103381.1"

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Line 7: Line 7:
 
|distance_to_tss=14
 
|distance_to_tss=14
 
|end=137459343
 
|end=137459343
 +
|end_of_center_position=137459320
 
|entrez_id=26012
 
|entrez_id=26012
 
|gc_percent=0.81592
 
|gc_percent=0.81592
−
|gene_alias=HH9|NELF
+
|gene_alias=HH9
 
|gene_description=NMDA receptor synaptonuclear signaling and neuronal migration factor
 
|gene_description=NMDA receptor synaptonuclear signaling and neuronal migration factor
 
|gene_id=26012
 
|gene_id=26012
Line 25: Line 26:
 
|species=human
 
|species=human
 
|start=137459296
 
|start=137459296
 +
|start_of_center_position=137459319
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000371475.7 ENST00000437259.5 ENST00000371474.7 ENST00000371473.7 ENST00000265663.11 ENST00000371472.6 NM_001178064 NM_001130971 NM_001130970 NM_001130969 NM_015537 uc004cmz.4 uc004cnb.4 uc004cnc.4 uc004cna.4 uc064xln.1 uc064xlp.1 AK074602 BC072412 AY255128 AY255129 AY255130 AY255131 AY255132
 
|transcript_name=ENST00000371475.7 ENST00000437259.5 ENST00000371474.7 ENST00000371473.7 ENST00000265663.11 ENST00000371472.6 NM_001178064 NM_001130971 NM_001130970 NM_001130969 NM_015537 uc004cmz.4 uc004cnb.4 uc004cnc.4 uc004cna.4 uc064xln.1 uc064xlp.1 AK074602 BC072412 AY255128 AY255129 AY255130 AY255131 AY255132

Revision as of 16:17, 11 May 2019

Basic information about the TSS

TSS ID:hg_103381.1
Species:human
Chr:chr9
TSS Classification:yes
Start:137459296
End:137459343
Strand:-
TSS Score:1
Start of the center position in the TSS region:137459319
End of the center position in the TSS region:137459320



Gene and protein annotation

Transcript_name:ENST00000371475.7 ENST00000437259.5 ENST00000371474.7 ENST00000371473.7 ENST00000265663.11 ENST00000371472.6 NM_001178064 NM_001130971 NM_001130970 NM_001130969 NM_015537 uc004cmz.4 uc004cnb.4 uc004cnc.4 uc004cna.4 uc064xln.1 uc064xlp.1 AK074602 BC072412 AY255128 AY255129 AY255130 AY255131 AY255132
Distance:0
GeneID:26012
HGNC/MGI_ID:HGNC:29843
UniProt_ID:Q6X4W1
Gene_name:NMDA receptor synaptonuclear signaling and neuronal migration factor
Gene_symbol:NSMF
Gene_synonyms:
Gene_source:HGNC:29843



Transcript annotation

Transcript_name:ENST00000371475.7 ENST00000437259.5 ENST00000371474.7 ENST00000371473.7 ENST00000265663.11 ENST00000371472.6 NM_001178064 NM_001130971 NM_001130970 NM_001130969 NM_015537 uc004cmz.4 uc004cnb.4 uc004cnc.4 uc004cna.4 uc064xln.1 uc064xlp.1 AK074602 BC072412 AY255128 AY255129 AY255130 AY255131 AY255132
Distance:0
Num_trans:27
All_trans:ENST00000371475.7:0 ENST00000437259.5:0 ENST00000371474.7:0 ENST00000371473.7:0 ENST00000265663.11:0 ENST00000371472.6:0 NM_001178064:0 NM_001130971:0 NM_001130970:0 NM_001130969:0 NM_015537:0 uc004cmz.4:0 uc004cnb.4:0 uc004cnc.4:0 uc004cna.4:0 uc064xln.1:0 uc064xlp.1:0 AK074602:0 BC072412:0 AY255128:0 AY255129:0 AY255130:0 AY255131:0 AY255132:0 BC110498:96 KJ893508:194 KJ893509:194



TATA-Box annotation

Distance to TSS:14
Nearest PromoterID:NM_001130971
Entrez ID:26012
Nearest Unigene:Hs.455336
Nearest Refseq:NM_015537
Nearest Ensembl:ENSG00000165802
Gene Name:NMDA receptor synaptonuclear signaling and neuronal migration factor
Gene Alias:HH9
Gene Description:NMDA receptor synaptonuclear signaling and neuronal migration factor
Gene Type:protein-coding
CpG%:0.15
GC%:0.81592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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