Difference between revisions of "TSS:Hg 243439.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AB307718:-103 HQ692856:-103 HQ709184:-103 EU446475:-104 AB463946:-104 JF432187:-105 KJ891201:-105 KR710870:-105 CU689402:-106 U76388:-118 |chr=chr9 |cpg...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ELP= | ||
| + | |FTZ1= | ||
| + | |FTZF1= | ||
| + | |POF7= | ||
| + | |SF-1= | ||
| + | |SF1= | ||
| + | |SPGF8= | ||
| + | |SRXY3= | ||
|all_trans=AB307718:-103 HQ692856:-103 HQ709184:-103 EU446475:-104 AB463946:-104 JF432187:-105 KJ891201:-105 KR710870:-105 CU689402:-106 U76388:-118 | |all_trans=AB307718:-103 HQ692856:-103 HQ709184:-103 EU446475:-104 AB463946:-104 JF432187:-105 KJ891201:-105 KR710870:-105 CU689402:-106 U76388:-118 | ||
|chr=chr9 | |chr=chr9 | ||
| Line 6: | Line 14: | ||
|distance_to_tss=4128 | |distance_to_tss=4128 | ||
|end=124503292 | |end=124503292 | ||
| + | |end_of_center_position=1296 | ||
|entrez_id=2516 | |entrez_id=2516 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=AD4BP | + | |gene_alias=AD4BP |
|gene_description=nuclear receptor subfamily 5 group A member 1 | |gene_description=nuclear receptor subfamily 5 group A member 1 | ||
|gene_id=2516 | |gene_id=2516 | ||
| Line 16: | Line 25: | ||
|gene_synonyms=AD4BP ELP FTZ1 SF-1 | |gene_synonyms=AD4BP ELP FTZ1 SF-1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hSF-1= | ||
|hgnc_mgi_id=HGNC:7983 | |hgnc_mgi_id=HGNC:7983 | ||
|nearest_ensembl=ENSG00000136931 | |nearest_ensembl=ENSG00000136931 | ||
| Line 24: | Line 34: | ||
|species=human | |species=human | ||
|start=124503291 | |start=124503291 | ||
| + | |start_of_center_position=1295 | ||
|strand=- | |strand=- | ||
|transcript_name=AB307718 HQ692856 HQ709184 | |transcript_name=AB307718 HQ692856 HQ709184 | ||
Revision as of 16:26, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 1295 |
|---|---|
| End of the center position in the TSS region: | 1296 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB307718 HQ692856 HQ709184 |
|---|---|
| Distance: | -103 |
| Num_trans: | 10 |
| All_trans: | AB307718:-103 HQ692856:-103 HQ709184:-103 EU446475:-104 AB463946:-104 JF432187:-105 KJ891201:-105 KR710870:-105 CU689402:-106 U76388:-118 |
TATA-Box annotation
| Distance to TSS: | 4128 |
|---|---|
| Nearest PromoterID: | NM_004959 |
| Entrez ID: | 2516 |
| Nearest Unigene: | Hs.495108 |
| Nearest Refseq: | NM_004959 |
| Nearest Ensembl: | ENSG00000136931 |
| Gene Name: | nuclear receptor subfamily 5 group A member 1 |
| Gene Alias: | AD4BP |
| Gene Description: | nuclear receptor subfamily 5 group A member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
