Difference between revisions of "TSS:Hg 243517.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC152818:18 BC156735:18 AB590758:18 AB593065:-89 ENST00000371746.7:-99 uc004cgz.3:-99 AF156889:-99 NM_014564:-114 AB593066:-114 |chr=chr9 |cpg_percent=0...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |LIM3= | ||
| + | |M2-LHX3= | ||
|all_trans=BC152818:18 BC156735:18 AB590758:18 AB593065:-89 ENST00000371746.7:-99 uc004cgz.3:-99 AF156889:-99 NM_014564:-114 AB593066:-114 | |all_trans=BC152818:18 BC156735:18 AB590758:18 AB593065:-89 ENST00000371746.7:-99 uc004cgz.3:-99 AF156889:-99 NM_014564:-114 AB593066:-114 | ||
|chr=chr9 | |chr=chr9 | ||
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|distance_to_tss=114 | |distance_to_tss=114 | ||
|end=136203059 | |end=136203059 | ||
| + | |end_of_center_position=2504 | ||
|entrez_id=8022 | |entrez_id=8022 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=CPHD3 | + | |gene_alias=CPHD3 |
|gene_description=LIM homeobox 3 | |gene_description=LIM homeobox 3 | ||
|gene_id=8022 | |gene_id=8022 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=136203058 | |start=136203058 | ||
| + | |start_of_center_position=2503 | ||
|strand=- | |strand=- | ||
|transcript_name=BC152818 BC156735 AB590758 | |transcript_name=BC152818 BC156735 AB590758 | ||
Revision as of 16:33, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 2503 |
|---|---|
| End of the center position in the TSS region: | 2504 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC152818 BC156735 AB590758 |
|---|---|
| Distance: | 18 |
| Num_trans: | 9 |
| All_trans: | BC152818:18 BC156735:18 AB590758:18 AB593065:-89 ENST00000371746.7:-99 uc004cgz.3:-99 AF156889:-99 NM_014564:-114 AB593066:-114 |
TATA-Box annotation
| Distance to TSS: | 114 |
|---|---|
| Nearest PromoterID: | NM_014564 |
| Entrez ID: | 8022 |
| Nearest Unigene: | Hs.148427 |
| Nearest Refseq: | NM_014564 |
| Nearest Ensembl: | ENSG00000107187 |
| Gene Name: | LIM homeobox 3 |
| Gene Alias: | CPHD3 |
| Gene Description: | LIM homeobox 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
