Difference between revisions of "TSS:Hg 243523.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000277541.6:72 uc004chz.4:72 NM_017617:148 AF308602:148 M73980:148 FR772924:-268 LG052812:-325 |chr=chr9 |cpg_percent=0.195 |distance=72 |distance...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AOVD1= | ||
| + | |TAN1= | ||
|all_trans=ENST00000277541.6:72 uc004chz.4:72 NM_017617:148 AF308602:148 M73980:148 FR772924:-268 LG052812:-325 | |all_trans=ENST00000277541.6:72 uc004chz.4:72 NM_017617:148 AF308602:148 M73980:148 FR772924:-268 LG052812:-325 | ||
|chr=chr9 | |chr=chr9 | ||
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|distance_to_tss=-148 | |distance_to_tss=-148 | ||
|end=136545934 | |end=136545934 | ||
| + | |end_of_center_position=2670 | ||
|entrez_id=4851 | |entrez_id=4851 | ||
|gc_percent=0.835821 | |gc_percent=0.835821 | ||
| − | |gene_alias=AOS5 | + | |gene_alias=AOS5 |
|gene_description=notch 1 | |gene_description=notch 1 | ||
|gene_id=4851 | |gene_id=4851 | ||
| Line 16: | Line 19: | ||
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hN1= | ||
|hgnc_mgi_id=HGNC:7881 | |hgnc_mgi_id=HGNC:7881 | ||
|nearest_ensembl=ENSG00000148400 | |nearest_ensembl=ENSG00000148400 | ||
| Line 24: | Line 28: | ||
|species=human | |species=human | ||
|start=136545933 | |start=136545933 | ||
| + | |start_of_center_position=2669 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000277541.6 uc004chz.4 | |transcript_name=ENST00000277541.6 uc004chz.4 | ||
Revision as of 16:34, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 2669 |
|---|---|
| End of the center position in the TSS region: | 2670 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000277541.6 uc004chz.4 |
|---|---|
| Distance: | 72 |
| Num_trans: | 7 |
| All_trans: | ENST00000277541.6:72 uc004chz.4:72 NM_017617:148 AF308602:148 M73980:148 FR772924:-268 LG052812:-325 |
TATA-Box annotation
| Distance to TSS: | -148 |
|---|---|
| Nearest PromoterID: | NM_017617 |
| Entrez ID: | 4851 |
| Nearest Unigene: | Hs.495473 |
| Nearest Refseq: | NM_017617 |
| Nearest Ensembl: | ENSG00000148400 |
| Gene Name: | notch 1 |
| Gene Alias: | AOS5 |
| Gene Description: | notch 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.195 |
| GC%: | 0.835821 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
