Difference between revisions of "TSS:Mm 100657.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000081318.12:0 ENSMUST00000144778.7:0 ENSMUST00000144359.7:0 ENSMUST00000138126.7:0 ENSMUST00000142315.7:0 ENSMUST00000118627.1:0 AK133558:0 AK...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=44 | |distance_to_tss=44 | ||
|end=3193450 | |end=3193450 | ||
| + | |end_of_center_position=3193420 | ||
|entrez_id=78887 | |entrez_id=78887 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=3193388 | |start=3193388 | ||
| + | |start_of_center_position=3193419 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000081318.12 ENSMUST00000144778.7 ENSMUST00000144359.7 ENSMUST00000138126.7 ENSMUST00000142315.7 ENSMUST00000118627.1 AK133558 AK129159 BC099677 BC046305 AK170090 BC106124 AK082866 | |transcript_name=ENSMUST00000081318.12 ENSMUST00000144778.7 ENSMUST00000144359.7 ENSMUST00000138126.7 ENSMUST00000142315.7 ENSMUST00000118627.1 AK133558 AK129159 BC099677 BC046305 AK170090 BC106124 AK082866 | ||
Revision as of 20:14, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 3193419 |
|---|---|
| End of the center position in the TSS region: | 3193420 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000081318.12 ENSMUST00000144778.7 ENSMUST00000144359.7 ENSMUST00000138126.7 ENSMUST00000142315.7 ENSMUST00000118627.1 AK133558 AK129159 BC099677 BC046305 AK170090 BC106124 AK082866 |
|---|---|
| Distance: | 0 |
| Num_trans: | 26 |
| All_trans: | ENSMUST00000081318.12:0 ENSMUST00000144778.7:0 ENSMUST00000144359.7:0 ENSMUST00000138126.7:0 ENSMUST00000142315.7:0 ENSMUST00000118627.1:0 AK133558:0 AK129159:0 BC099677:0 BC046305:0 AK170090:0 BC106124:0 AK082866:0 ENSMUST00000132893.7:-10 AK046135:-10 AK046373:-10 ENSMUST00000066391.13:-13 NM_030207:-13 uc007hrt.1:-13 uc007hru.1:-13 uc007hrx.1:-13 uc007hsa.1:-13 uc007hsb.1:-13 AB341343:121 AB341344:-230 AB341341:292 |
TATA-Box annotation
| Distance to TSS: | 44 |
|---|---|
| Nearest PromoterID: | NM_030207 |
| Entrez ID: | 78887 |
| Nearest Unigene: | Mm.394071 |
| Nearest Refseq: | NM_030207 |
| Nearest Ensembl: | ENSMUSG00000023764 |
| Gene Name: | "Sfi1 homolog, spindle assembly associated (yeast)" |
| Gene Alias: | - |
| Gene Description: | "Sfi1 homolog, spindle assembly associated (yeast)" |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
