Difference between revisions of "TSS:Mm 100665.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000155332.1:3 AK029003:3 |chr=chr11 |cpg_percent=0.025 |distance=3 |distance_to_tss=460 |end=3331201 |entrez_id=216505 |gc_percent=0.452736 |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |5830455E04Rik= | ||
| + | |Crkd= | ||
| + | |Hgfl= | ||
|all_trans=ENSMUST00000155332.1:3 AK029003:3 | |all_trans=ENSMUST00000155332.1:3 AK029003:3 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=460 | |distance_to_tss=460 | ||
|end=3331201 | |end=3331201 | ||
| + | |end_of_center_position=3331191 | ||
|entrez_id=216505 | |entrez_id=216505 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| − | |gene_alias=1500004A08Rik | + | |gene_alias=1500004A08Rik |
|gene_description=phosphoinositide-3-kinase interacting protein 1 | |gene_description=phosphoinositide-3-kinase interacting protein 1 | ||
|gene_id=791413 | |gene_id=791413 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=3331180 | |start=3331180 | ||
| + | |start_of_center_position=3331190 | ||
|strand=- | |strand=- | ||
|tata_box="-92(GACTTTAAAAGG,-,0.00),-91(ACTTTAAAAGGG,+,0.00)" | |tata_box="-92(GACTTTAAAAGG,-,0.00),-91(ACTTTAAAAGGG,+,0.00)" | ||
Revision as of 20:18, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 3331190 |
|---|---|
| End of the center position in the TSS region: | 3331191 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000155332.1 AK029003 |
|---|---|
| Distance: | 3 |
| Num_trans: | 2 |
| All_trans: | ENSMUST00000155332.1:3 AK029003:3 |
TATA-Box annotation
| Distance to TSS: | 460 |
|---|---|
| Nearest PromoterID: | NM_178149 |
| Entrez ID: | 216505 |
| Nearest Unigene: | Mm.390323 |
| Nearest Refseq: | NM_178149 |
| Nearest Ensembl: | ENSMUSG00000034614 |
| Gene Name: | predicted gene 12592 |
| Gene Alias: | 1500004A08Rik |
| Gene Description: | phosphoinositide-3-kinase interacting protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-92(GACTTTAAAAGG,-,0.00),-91(ACTTTAAAAGGG,+,0.00)" |
