Difference between revisions of "TSS:Mm 100679.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001290473:-57 NR_110959:-57 NM_145355:-57 NM_001290472:-57 uc007hsv.2:-57 uc007hsw.2:-57 uc056yje.1:-57 uc056yjf.1:-57 AK075756:-57 |chr=chr11 |cpg_p...") |
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|distance_to_tss=63 | |distance_to_tss=63 | ||
|end=3452899 | |end=3452899 | ||
| + | |end_of_center_position=3452894 | ||
|entrez_id=193670 | |entrez_id=193670 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
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|species=mouse | |species=mouse | ||
|start=3452887 | |start=3452887 | ||
| + | |start_of_center_position=3452893 | ||
|strand=- | |strand=- | ||
|tata_box="-35(TACTATAAAAGG,-,0.00)" | |tata_box="-35(TACTATAAAAGG,-,0.00)" | ||
Revision as of 20:19, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 3452893 |
|---|---|
| End of the center position in the TSS region: | 3452894 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001290473 NR_110959 NM_145355 NM_001290472 uc007hsv.2 uc007hsw.2 uc056yje.1 uc056yjf.1 AK075756 |
|---|---|
| Distance: | -57 |
| Num_trans: | 9 |
| All_trans: | NM_001290473:-57 NR_110959:-57 NM_145355:-57 NM_001290472:-57 uc007hsv.2:-57 uc007hsw.2:-57 uc056yje.1:-57 uc056yjf.1:-57 AK075756:-57 |
TATA-Box annotation
| Distance to TSS: | 63 |
|---|---|
| Nearest PromoterID: | NM_001290472 |
| Entrez ID: | 193670 |
| Nearest Unigene: | Mm.136973 |
| Nearest Refseq: | NM_145355 |
| Nearest Ensembl: | ENSMUSG00000020448 |
| Gene Name: | ring finger protein 185 |
| Gene Alias: | - |
| Gene Description: | ring finger protein 185 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(TACTATAAAAGG,-,0.00)" |
