Difference between revisions of "TSS:Mm 100680.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001290473:-4 NR_110959:-4 NM_145355:-4 NM_001290472:-4 uc007hsv.2:-4 uc007hsw.2:-4 uc056yje.1:-4 uc056yjf.1:-4 AK075756:-4 |chr=chr11 |cpg_percent=0....") |
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| Line 6: | Line 6: | ||
|distance_to_tss=11 | |distance_to_tss=11 | ||
|end=3452952 | |end=3452952 | ||
| + | |end_of_center_position=3452945 | ||
|entrez_id=193670 | |entrez_id=193670 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=3452937 | |start=3452937 | ||
| + | |start_of_center_position=3452944 | ||
|strand=- | |strand=- | ||
|tata_box="17(TACTATAAAAGG,-,0.00)" | |tata_box="17(TACTATAAAAGG,-,0.00)" | ||
Revision as of 20:20, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 3452944 |
|---|---|
| End of the center position in the TSS region: | 3452945 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001290473 NR_110959 NM_145355 NM_001290472 uc007hsv.2 uc007hsw.2 uc056yje.1 uc056yjf.1 AK075756 |
|---|---|
| Distance: | -4 |
| Num_trans: | 9 |
| All_trans: | NM_001290473:-4 NR_110959:-4 NM_145355:-4 NM_001290472:-4 uc007hsv.2:-4 uc007hsw.2:-4 uc056yje.1:-4 uc056yjf.1:-4 AK075756:-4 |
TATA-Box annotation
| Distance to TSS: | 11 |
|---|---|
| Nearest PromoterID: | NM_001290472 |
| Entrez ID: | 193670 |
| Nearest Unigene: | Mm.136973 |
| Nearest Refseq: | NM_145355 |
| Nearest Ensembl: | ENSMUSG00000020448 |
| Gene Name: | ring finger protein 185 |
| Gene Alias: | - |
| Gene Description: | ring finger protein 185 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "17(TACTATAAAAGG,-,0.00)" |
