Difference between revisions of "TSS:Mm 100702.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK033381:0 AK083955:-9 ENSMUST00000132077.2:-18 AK048213:-18 AK049839:-18 ENSMUST00000153313.8:-22 AK165129:-22 uc029rkg.1:-25 AK162835:-25 NR_110490:-2...") |
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|distance_to_tss=46 | |distance_to_tss=46 | ||
|end=3647508 | |end=3647508 | ||
| + | |end_of_center_position=3647490 | ||
|entrez_id=544752 | |entrez_id=544752 | ||
|gc_percent=0.318408 | |gc_percent=0.318408 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=3647471 | |start=3647471 | ||
| + | |start_of_center_position=3647489 | ||
|strand=- | |strand=- | ||
|transcript_name=AK033381 | |transcript_name=AK033381 | ||
Revision as of 20:23, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 3647489 |
|---|---|
| End of the center position in the TSS region: | 3647490 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK033381 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | AK033381:0 AK083955:-9 ENSMUST00000132077.2:-18 AK048213:-18 AK049839:-18 ENSMUST00000153313.8:-22 AK165129:-22 uc029rkg.1:-25 AK162835:-25 NR_110490:-28 NR_002322:-28 uc007htj.2:-28 uc007htl.2:-28 DQ517434:-28 BC048828:60 ENSMUST00000184580.1:147 ENSMUST00000183605.1:443 |
TATA-Box annotation
| Distance to TSS: | 46 |
|---|---|
| Nearest PromoterID: | NR_110490 |
| Entrez ID: | 544752 |
| Nearest Unigene: | Mm.390314 |
| Nearest Refseq: | NR_002321 |
| Nearest Ensembl: | ENSMUSG00000056579 |
| Gene Name: | taurine upregulated gene 1 |
| Gene Alias: | AI316828 |
| Gene Description: | taurine upregulated gene 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.318408 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
