Difference between revisions of "TSS:Mm 100705.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=DQ517435:-1 ENSMUST00000144852.1:-5 NR_002321:-7 uc007htk.2:-7 AK088174:-7 ENSMUST00000182330.1:-235 DQ685326:428 |chr=chr11 |cpg_percent=0.165 |distanc...") |
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|distance_to_tss=40 | |distance_to_tss=40 | ||
|end=3648807 | |end=3648807 | ||
| + | |end_of_center_position=3648775 | ||
|entrez_id=544752 | |entrez_id=544752 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
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|species=mouse | |species=mouse | ||
|start=3648741 | |start=3648741 | ||
| + | |start_of_center_position=3648774 | ||
|strand=- | |strand=- | ||
|transcript_name=DQ517435 | |transcript_name=DQ517435 | ||
Revision as of 20:23, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 3648774 |
|---|---|
| End of the center position in the TSS region: | 3648775 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | DQ517435 |
|---|---|
| Distance: | -1 |
| Num_trans: | 7 |
| All_trans: | DQ517435:-1 ENSMUST00000144852.1:-5 NR_002321:-7 uc007htk.2:-7 AK088174:-7 ENSMUST00000182330.1:-235 DQ685326:428 |
TATA-Box annotation
| Distance to TSS: | 40 |
|---|---|
| Nearest PromoterID: | NR_002321 |
| Entrez ID: | 544752 |
| Nearest Unigene: | Mm.390314 |
| Nearest Refseq: | NR_002321 |
| Nearest Ensembl: | ENSMUSG00000056579 |
| Gene Name: | taurine upregulated gene 1 |
| Gene Alias: | AI316828 |
| Gene Description: | taurine upregulated gene 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.165 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
