Difference between revisions of "TSS:Mm 100707.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000182330.1:20 NR_002321:248 uc007htk.2:248 AK088174:248 ENSMUST00000144852.1:250 DQ517435:254 |chr=chr11 |cpg_percent=0.1 |distance=20 |distan...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-255 | |distance_to_tss=-255 | ||
|end=3649077 | |end=3649077 | ||
| + | |end_of_center_position=3649070 | ||
|entrez_id=544752 | |entrez_id=544752 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=3649061 | |start=3649061 | ||
| + | |start_of_center_position=3649069 | ||
|strand=- | |strand=- | ||
|tata_box="15(GGCCATTTAAAG,-,0.00),17(CCATTTAAAGGA,+,0.00)" | |tata_box="15(GGCCATTTAAAG,-,0.00),17(CCATTTAAAGGA,+,0.00)" | ||
Revision as of 20:24, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 3649069 |
|---|---|
| End of the center position in the TSS region: | 3649070 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000182330.1 |
|---|---|
| Distance: | 20 |
| Num_trans: | 6 |
| All_trans: | ENSMUST00000182330.1:20 NR_002321:248 uc007htk.2:248 AK088174:248 ENSMUST00000144852.1:250 DQ517435:254 |
TATA-Box annotation
| Distance to TSS: | -255 |
|---|---|
| Nearest PromoterID: | NR_002321 |
| Entrez ID: | 544752 |
| Nearest Unigene: | Mm.390314 |
| Nearest Refseq: | NR_002321 |
| Nearest Ensembl: | ENSMUSG00000056579 |
| Gene Name: | taurine upregulated gene 1 |
| Gene Alias: | AI316828 |
| Gene Description: | taurine upregulated gene 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.1 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "15(GGCCATTTAAAG,-,0.00),17(CCATTTAAAGGA,+,0.00)" |
