Difference between revisions of "TSS:Mm 100712.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=uc007htp.1:8 BC058356:8 ENSMUST00000155197.1:402 |chr=chr11 |cpg_percent=0.025 |distance=8 |distance_to_tss=-52921 |end=3775162 |entrez_id=74309 |gc_per...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |C630001G20Rik= | ||
| + | |Gm244= | ||
| + | |ORP-4= | ||
| + | |OSBPL1= | ||
|all_trans=uc007htp.1:8 BC058356:8 ENSMUST00000155197.1:402 | |all_trans=uc007htp.1:8 BC058356:8 ENSMUST00000155197.1:402 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-52921 | |distance_to_tss=-52921 | ||
|end=3775162 | |end=3775162 | ||
| + | |end_of_center_position=3775148 | ||
|entrez_id=74309 | |entrez_id=74309 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias=1700095P05Rik | + | |gene_alias=1700095P05Rik |
|gene_description=oxysterol binding protein 2 | |gene_description=oxysterol binding protein 2 | ||
|gene_id=74309 | |gene_id=74309 | ||
| Line 24: | Line 29: | ||
|species=mouse | |species=mouse | ||
|start=3775133 | |start=3775133 | ||
| + | |start_of_center_position=3775147 | ||
|strand=- | |strand=- | ||
|transcript_name=uc007htp.1 BC058356 | |transcript_name=uc007htp.1 BC058356 | ||
Revision as of 20:24, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 3775147 |
|---|---|
| End of the center position in the TSS region: | 3775148 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | uc007htp.1 BC058356 |
|---|---|
| Distance: | 8 |
| Num_trans: | 3 |
| All_trans: | uc007htp.1:8 BC058356:8 ENSMUST00000155197.1:402 |
TATA-Box annotation
| Distance to TSS: | -52921 |
|---|---|
| Nearest PromoterID: | NM_001302630 |
| Entrez ID: | 74309 |
| Nearest Unigene: | Mm.61022 |
| Nearest Refseq: | NM_152818 |
| Nearest Ensembl: | ENSMUSG00000020435 |
| Gene Name: | oxysterol binding protein 2 |
| Gene Alias: | 1700095P05Rik |
| Gene Description: | oxysterol binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
