Difference between revisions of "TSS:Mm 100721.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC020181:49 BC095957:-64 AK205099:105 AB341349:302 AK195689:403 |chr=chr11 |cpg_percent=0.125 |distance=49 |distance_to_tss=912 |end=3913757 |entrez_id=...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |AI414849= | ||
| + | |AI536442= | ||
|all_trans=BC020181:49 BC095957:-64 AK205099:105 AB341349:302 AK195689:403 | |all_trans=BC020181:49 BC095957:-64 AK205099:105 AB341349:302 AK195689:403 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=912 | |distance_to_tss=912 | ||
|end=3913757 | |end=3913757 | ||
| + | |end_of_center_position=3913752 | ||
|entrez_id=103710 | |entrez_id=103710 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| − | |gene_alias=A330108F03Rik | + | |gene_alias=A330108F03Rik |
|gene_description="solute carrier family 35, member E4" | |gene_description="solute carrier family 35, member E4" | ||
|gene_id=103710 | |gene_id=103710 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=3913746 | |start=3913746 | ||
| + | |start_of_center_position=3913751 | ||
|strand=- | |strand=- | ||
|transcript_name=BC020181 | |transcript_name=BC020181 | ||
Revision as of 20:25, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3913751 |
|---|---|
| End of the center position in the TSS region: | 3913752 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC020181 |
|---|---|
| Distance: | 49 |
| Num_trans: | 5 |
| All_trans: | BC020181:49 BC095957:-64 AK205099:105 AB341349:302 AK195689:403 |
TATA-Box annotation
| Distance to TSS: | 912 |
|---|---|
| Nearest PromoterID: | NM_153142 |
| Entrez ID: | 103710 |
| Nearest Unigene: | Mm.171514 |
| Nearest Refseq: | NM_153142 |
| Nearest Ensembl: | ENSMUSG00000048807 |
| Gene Name: | "solute carrier family 35, member E4" |
| Gene Alias: | A330108F03Rik |
| Gene Description: | "solute carrier family 35, member E4" |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
