Difference between revisions of "TSS:Mm 100748.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000132712.1:0 AK220409:0 AK161195:0 ENSMUST00000093381.10:-9 AK143216:9 ENSMUST00000101626.8:-11 NM_177616:-11 NM_001164620:-11 uc007hul.1:-11...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=36 | |distance_to_tss=36 | ||
|end=4160282 | |end=4160282 | ||
| + | |end_of_center_position=4160258 | ||
|entrez_id=216516 | |entrez_id=216516 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=4930562D19Rik | + | |gene_alias=4930562D19Rik |
|gene_description=coiled-coil domain containing 157 | |gene_description=coiled-coil domain containing 157 | ||
|gene_id=216516 | |gene_id=216516 | ||
| Line 17: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:3041210 | |hgnc_mgi_id=MGI:3041210 | ||
| + | |mKIAA1656= | ||
|nearest_ensembl=ENSMUSG00000051427 | |nearest_ensembl=ENSMUSG00000051427 | ||
|nearest_promoter_id=NM_177616 | |nearest_promoter_id=NM_177616 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=4160232 | |start=4160232 | ||
| + | |start_of_center_position=4160257 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000132712.1 AK220409 AK161195 | |transcript_name=ENSMUST00000132712.1 AK220409 AK161195 | ||
Revision as of 20:30, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 4160257 |
|---|---|
| End of the center position in the TSS region: | 4160258 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000132712.1 AK220409 AK161195 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENSMUST00000132712.1:0 AK220409:0 AK161195:0 ENSMUST00000093381.10:-9 AK143216:9 ENSMUST00000101626.8:-11 NM_177616:-11 NM_001164620:-11 uc007hul.1:-11 uc007hum.1:-11 uc007hun.2:-11 AK133165:-11 AK076934:13 ENSMUST00000139099.7:15 ENSMUST00000133962.7:15 |
TATA-Box annotation
| Distance to TSS: | 36 |
|---|---|
| Nearest PromoterID: | NM_177616 |
| Entrez ID: | 216516 |
| Nearest Unigene: | Mm.386854 |
| Nearest Refseq: | NM_177616 |
| Nearest Ensembl: | ENSMUSG00000051427 |
| Gene Name: | coiled-coil domain containing 157 |
| Gene Alias: | 4930562D19Rik |
| Gene Description: | coiled-coil domain containing 157 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
