Difference between revisions of "TSS:Mm 100765.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000109943.9:0 NM_028860:0 uc007hux.1:0 uc011xqx.1:0 uc007huy.1:0 BC081544:0 BC032166:0 AK141138:0 ENSMUST00000130716.7:-43 |chr=chr11 |cpg_perc...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |AI255150= | ||
| + | |AW557713= | ||
| + | |FYVE-DSP1= | ||
| + | |ZFYVE10= | ||
|all_trans=ENSMUST00000109943.9:0 NM_028860:0 uc007hux.1:0 uc011xqx.1:0 uc007huy.1:0 BC081544:0 BC032166:0 AK141138:0 ENSMUST00000130716.7:-43 | |all_trans=ENSMUST00000109943.9:0 NM_028860:0 uc007hux.1:0 uc011xqx.1:0 uc007huy.1:0 BC081544:0 BC032166:0 AK141138:0 ENSMUST00000130716.7:-43 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=30 | |distance_to_tss=30 | ||
|end=4594820 | |end=4594820 | ||
| + | |end_of_center_position=4594786 | ||
|entrez_id=74302 | |entrez_id=74302 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
| − | |gene_alias=1700092A20Rik | + | |gene_alias=1700092A20Rik |
|gene_description=myotubularin related protein 3 | |gene_description=myotubularin related protein 3 | ||
|gene_id=74302 | |gene_id=74302 | ||
| Line 17: | Line 22: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1921552 | |hgnc_mgi_id=MGI:1921552 | ||
| + | |mKIAA0371= | ||
|nearest_ensembl=ENSMUSG00000034354 | |nearest_ensembl=ENSMUSG00000034354 | ||
|nearest_promoter_id=NM_028860 | |nearest_promoter_id=NM_028860 | ||
| Line 24: | Line 30: | ||
|species=mouse | |species=mouse | ||
|start=4594750 | |start=4594750 | ||
| + | |start_of_center_position=4594785 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000109943.9 NM_028860 uc007hux.1 uc011xqx.1 uc007huy.1 BC081544 BC032166 AK141138 | |transcript_name=ENSMUST00000109943.9 NM_028860 uc007hux.1 uc011xqx.1 uc007huy.1 BC081544 BC032166 AK141138 | ||
Revision as of 20:34, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 4594785 |
|---|---|
| End of the center position in the TSS region: | 4594786 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000109943.9 NM_028860 uc007hux.1 uc011xqx.1 uc007huy.1 BC081544 BC032166 AK141138 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000109943.9:0 NM_028860:0 uc007hux.1:0 uc011xqx.1:0 uc007huy.1:0 BC081544:0 BC032166:0 AK141138:0 ENSMUST00000130716.7:-43 |
TATA-Box annotation
| Distance to TSS: | 30 |
|---|---|
| Nearest PromoterID: | NM_028860 |
| Entrez ID: | 74302 |
| Nearest Unigene: | Mm.425669 |
| Nearest Refseq: | NM_028860 |
| Nearest Ensembl: | ENSMUSG00000034354 |
| Gene Name: | myotubularin related protein 3 |
| Gene Alias: | 1700092A20Rik |
| Gene Description: | myotubularin related protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
