Difference between revisions of "TSS:Mm 100789.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK149109:250 |chr=chr11 |cpg_percent=0.01 |distance=250 |distance_to_tss=-7980 |end=4939546 |entrez_id=11764 |gc_percent=0.522388 |gene_alias=Adtb1|b2b1...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=AK149109:250 | |all_trans=AK149109:250 | ||
| + | |b2b1660Clo= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-7980 | |distance_to_tss=-7980 | ||
|end=4939546 | |end=4939546 | ||
| + | |end_of_center_position=4939541 | ||
|entrez_id=11764 | |entrez_id=11764 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=Adtb1 | + | |gene_alias=Adtb1 |
|gene_description="adaptor protein complex AP-1, beta 1 subunit" | |gene_description="adaptor protein complex AP-1, beta 1 subunit" | ||
|gene_id=380684 | |gene_id=380684 | ||
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|species=mouse | |species=mouse | ||
|start=4939535 | |start=4939535 | ||
| + | |start_of_center_position=4939540 | ||
|strand=- | |strand=- | ||
|transcript_name=AK149109 | |transcript_name=AK149109 | ||
Revision as of 20:38, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 4939540 |
|---|---|
| End of the center position in the TSS region: | 4939541 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK149109 |
|---|---|
| Distance: | 250 |
| Num_trans: | 1 |
| All_trans: | AK149109:250 |
TATA-Box annotation
| Distance to TSS: | -7980 |
|---|---|
| Nearest PromoterID: | NM_001243043 |
| Entrez ID: | 11764 |
| Nearest Unigene: | Mm.274816 |
| Nearest Refseq: | NM_007454 |
| Nearest Ensembl: | ENSMUSG00000009090 |
| Gene Name: | "neurofilament, heavy polypeptide" |
| Gene Alias: | Adtb1 |
| Gene Description: | "adaptor protein complex AP-1, beta 1 subunit" |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
