Difference between revisions of "TSS:Hg 23299.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000259075.6:0 ENST00000432002.5:0 uc002ubr.3:0 uc061oxp.1:0 NM_004180:13 NM_133484:13 U63830:13 U59863:13 ENST00000463502.1:24 uc061oxq.1:24 |chr=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ITRAF= | ||
| + | |TRAF2= | ||
|all_trans=ENST00000259075.6:0 ENST00000432002.5:0 uc002ubr.3:0 uc061oxp.1:0 NM_004180:13 NM_133484:13 U63830:13 U59863:13 ENST00000463502.1:24 uc061oxq.1:24 | |all_trans=ENST00000259075.6:0 ENST00000432002.5:0 uc002ubr.3:0 uc061oxp.1:0 NM_004180:13 NM_133484:13 U63830:13 U59863:13 ENST00000463502.1:24 uc061oxq.1:24 | ||
|chr=chr2 | |chr=chr2 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-33 | |distance_to_tss=-33 | ||
|end=161136942 | |end=161136942 | ||
| + | |end_of_center_position=161136922 | ||
|entrez_id=10010 | |entrez_id=10010 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
| − | |gene_alias=I-TRAF | + | |gene_alias=I-TRAF |
|gene_description=TRAF family member associated NFKB activator | |gene_description=TRAF family member associated NFKB activator | ||
|gene_id=10010 | |gene_id=10010 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=161136901 | |start=161136901 | ||
| + | |start_of_center_position=161136921 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000259075.6 ENST00000432002.5 uc002ubr.3 uc061oxp.1 | |transcript_name=ENST00000259075.6 ENST00000432002.5 uc002ubr.3 uc061oxp.1 | ||
Revision as of 20:40, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 161136921 |
|---|---|
| End of the center position in the TSS region: | 161136922 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000259075.6 ENST00000432002.5 uc002ubr.3 uc061oxp.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000259075.6:0 ENST00000432002.5:0 uc002ubr.3:0 uc061oxp.1:0 NM_004180:13 NM_133484:13 U63830:13 U59863:13 ENST00000463502.1:24 uc061oxq.1:24 |
TATA-Box annotation
| Distance to TSS: | -33 |
|---|---|
| Nearest PromoterID: | NM_133484 |
| Entrez ID: | 10010 |
| Nearest Unigene: | Hs.132257 |
| Nearest Refseq: | NM_004180 |
| Nearest Ensembl: | ENSG00000136560 |
| Gene Name: | TRAF family member associated NFKB activator |
| Gene Alias: | I-TRAF |
| Gene Description: | TRAF family member associated NFKB activator |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
