Difference between revisions of "TSS:Mm 100809.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK019460:-278 ENSMUST00000102930.9:-283 AK150345:-284 AK153276:-286 AK147909:-286 AK147103:-295 BC068226:-296 AK151625:-300 AK034755:-302 AK146791:-304...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Ewsh= | ||
|all_trans=AK019460:-278 ENSMUST00000102930.9:-283 AK150345:-284 AK153276:-286 AK147909:-286 AK147103:-295 BC068226:-296 AK151625:-300 AK034755:-302 AK146791:-304 ENSMUST00000093365.11:-307 ENSMUST00000073308.10:-308 ENSMUST00000151847.1:-308 AK049743:-308 X79233:-318 NM_007968:-329 NM_001283061:-329 NM_001283062:-329 NM_001283063:-329 uc007hvw.2:-329 uc007hvx.2:-329 uc007hvy.2:-329 uc007hvz.2:-329 uc007hwa.2:-329 ENSMUST00000063232.6:-337 AK046434:-337 | |all_trans=AK019460:-278 ENSMUST00000102930.9:-283 AK150345:-284 AK153276:-286 AK147909:-286 AK147103:-295 BC068226:-296 AK151625:-300 AK034755:-302 AK146791:-304 ENSMUST00000093365.11:-307 ENSMUST00000073308.10:-308 ENSMUST00000151847.1:-308 AK049743:-308 X79233:-318 NM_007968:-329 NM_001283061:-329 NM_001283062:-329 NM_001283063:-329 uc007hvw.2:-329 uc007hvx.2:-329 uc007hvy.2:-329 uc007hvz.2:-329 uc007hwa.2:-329 ENSMUST00000063232.6:-337 AK046434:-337 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=333 | |distance_to_tss=333 | ||
|end=5098759 | |end=5098759 | ||
| + | |end_of_center_position=5098755 | ||
|entrez_id=14030 | |entrez_id=14030 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=Ews | + | |gene_alias=Ews |
|gene_description=Ewing sarcoma breakpoint region 1 | |gene_description=Ewing sarcoma breakpoint region 1 | ||
|gene_id=14030 | |gene_id=14030 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=5098750 | |start=5098750 | ||
| + | |start_of_center_position=5098754 | ||
|strand=- | |strand=- | ||
|transcript_name=AK019460 | |transcript_name=AK019460 | ||
Revision as of 20:42, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 5098754 |
|---|---|
| End of the center position in the TSS region: | 5098755 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK019460 |
|---|---|
| Distance: | -278 |
| Num_trans: | 26 |
| All_trans: | AK019460:-278 ENSMUST00000102930.9:-283 AK150345:-284 AK153276:-286 AK147909:-286 AK147103:-295 BC068226:-296 AK151625:-300 AK034755:-302 AK146791:-304 ENSMUST00000093365.11:-307 ENSMUST00000073308.10:-308 ENSMUST00000151847.1:-308 AK049743:-308 X79233:-318 NM_007968:-329 NM_001283061:-329 NM_001283062:-329 NM_001283063:-329 uc007hvw.2:-329 uc007hvx.2:-329 uc007hvy.2:-329 uc007hvz.2:-329 uc007hwa.2:-329 ENSMUST00000063232.6:-337 AK046434:-337 |
TATA-Box annotation
| Distance to TSS: | 333 |
|---|---|
| Nearest PromoterID: | NM_001283062 |
| Entrez ID: | 14030 |
| Nearest Unigene: | Mm.142822 |
| Nearest Refseq: | NM_007968 |
| Nearest Ensembl: | ENSMUSG00000009079 |
| Gene Name: | Ewing sarcoma breakpoint region 1 |
| Gene Alias: | Ews |
| Gene Description: | Ewing sarcoma breakpoint region 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
