Difference between revisions of "TSS:Mm 100813.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000079949.12:-24 ENSMUST00000063232.6:128 AK046434:128 NM_007968:136 NM_001283061:136 NM_001283062:136 NM_001283063:136 uc007hvw.2:136 uc007hvx...") |
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|distance_to_tss=-40 | |distance_to_tss=-40 | ||
|end=5099242 | |end=5099242 | ||
| + | |end_of_center_position=5099233 | ||
|entrez_id=279766 | |entrez_id=279766 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
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|species=mouse | |species=mouse | ||
|start=5099223 | |start=5099223 | ||
| + | |start_of_center_position=5099232 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000079949.12 | |transcript_name=ENSMUST00000079949.12 | ||
Revision as of 20:43, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 5099232 |
|---|---|
| End of the center position in the TSS region: | 5099233 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000079949.12 |
|---|---|
| Distance: | -24 |
| Num_trans: | 27 |
| All_trans: | ENSMUST00000079949.12:-24 ENSMUST00000063232.6:128 AK046434:128 NM_007968:136 NM_001283061:136 NM_001283062:136 NM_001283063:136 uc007hvw.2:136 uc007hvx.2:136 uc007hvy.2:136 uc007hvz.2:136 uc007hwa.2:136 X79233:147 ENSMUST00000073308.10:157 ENSMUST00000151847.1:157 AK049743:157 ENSMUST00000093365.11:158 AK146791:161 AK034755:163 AK151625:165 BC068226:169 AK147103:170 AK153276:179 AK147909:179 AK150345:181 ENSMUST00000102930.9:182 AK019460:187 |
TATA-Box annotation
| Distance to TSS: | -40 |
|---|---|
| Nearest PromoterID: | NM_001290492 |
| Entrez ID: | 279766 |
| Nearest Unigene: | Mm.260866 |
| Nearest Refseq: | NM_177370 |
| Nearest Ensembl: | ENSMUSG00000034175 |
| Gene Name: | Ewing sarcoma breakpoint region 1 |
| Gene Alias: | Ptag |
| Gene Description: | rhomboid domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
