Difference between revisions of "TSS:Mm 100816.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000132196.1:0 ENSMUST00000153308.1:158 BC021849:182 ENSMUST00000151906.7:-220 BC012248:-374 uc007hwf.1:-460 |chr=chr11 |cpg_percent=0.02 |dista...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CO-5= | ||
| + | |Emu1= | ||
|all_trans=ENSMUST00000132196.1:0 ENSMUST00000153308.1:158 BC021849:182 ENSMUST00000151906.7:-220 BC012248:-374 uc007hwf.1:-460 | |all_trans=ENSMUST00000132196.1:0 ENSMUST00000153308.1:158 BC021849:182 ENSMUST00000151906.7:-220 BC012248:-374 uc007hwf.1:-460 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=22982 | |distance_to_tss=22982 | ||
|end=5129260 | |end=5129260 | ||
| + | |end_of_center_position=5129241 | ||
|entrez_id=140703 | |entrez_id=140703 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| − | |gene_alias=AW122071 | + | |gene_alias=AW122071 |
|gene_description=EMI domain containing 1 | |gene_description=EMI domain containing 1 | ||
|gene_id=140703 | |gene_id=140703 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=5129220 | |start=5129220 | ||
| + | |start_of_center_position=5129240 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000132196.1 | |transcript_name=ENSMUST00000132196.1 | ||
Revision as of 20:44, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 5129240 |
|---|---|
| End of the center position in the TSS region: | 5129241 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000132196.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENSMUST00000132196.1:0 ENSMUST00000153308.1:158 BC021849:182 ENSMUST00000151906.7:-220 BC012248:-374 uc007hwf.1:-460 |
TATA-Box annotation
| Distance to TSS: | 22982 |
|---|---|
| Nearest PromoterID: | NM_080595 |
| Entrez ID: | 140703 |
| Nearest Unigene: | Mm.840 |
| Nearest Refseq: | NM_080595 |
| Nearest Ensembl: | ENSMUSG00000034164 |
| Gene Name: | EMI domain containing 1 |
| Gene Alias: | AW122071 |
| Gene Description: | EMI domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
