Difference between revisions of "TSS:Mm 100834.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=uc056yjl.1:-23 AK155948:-23 DQ541770:266 BC034558:-381 BC059888:-398 ENSMUST00000020776.4:-413 BC018601:-413 NM_134033:-443 uc007hwp.2:-443 |chr=chr11 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |1700026O03Rik= | ||
| + | |AU018638= | ||
| + | |AU042822= | ||
| + | |AV173073= | ||
| + | |BC018601= | ||
|all_trans=uc056yjl.1:-23 AK155948:-23 DQ541770:266 BC034558:-381 BC059888:-398 ENSMUST00000020776.4:-413 BC018601:-413 NM_134033:-443 uc007hwp.2:-443 | |all_trans=uc056yjl.1:-23 AK155948:-23 DQ541770:266 BC034558:-381 BC059888:-398 ENSMUST00000020776.4:-413 BC018601:-413 NM_134033:-443 uc007hwp.2:-443 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=446 | |distance_to_tss=446 | ||
|end=5541774 | |end=5541774 | ||
| + | |end_of_center_position=5541772 | ||
|entrez_id=104479 | |entrez_id=104479 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=1110004K02Rik | + | |gene_alias=1110004K02Rik |
|gene_description=coiled-coil domain containing 117 | |gene_description=coiled-coil domain containing 117 | ||
|gene_name=Ccdc117 | |gene_name=Ccdc117 | ||
| Line 19: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=5541768 | |start=5541768 | ||
| + | |start_of_center_position=5541771 | ||
|strand=- | |strand=- | ||
|transcript_name=uc056yjl.1 AK155948 | |transcript_name=uc056yjl.1 AK155948 | ||
Revision as of 20:47, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 5541771 |
|---|---|
| End of the center position in the TSS region: | 5541772 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | uc056yjl.1 AK155948 |
|---|---|
| Distance: | -23 |
| Num_trans: | 9 |
| All_trans: | uc056yjl.1:-23 AK155948:-23 DQ541770:266 BC034558:-381 BC059888:-398 ENSMUST00000020776.4:-413 BC018601:-413 NM_134033:-443 uc007hwp.2:-443 |
TATA-Box annotation
| Distance to TSS: | 446 |
|---|---|
| Nearest PromoterID: | NM_134033 |
| Entrez ID: | 104479 |
| Nearest Unigene: | Mm.210403 |
| Nearest Refseq: | NM_134033 |
| Nearest Ensembl: | ENSMUSG00000020482 |
| Gene Name: | Ccdc117 |
| Gene Alias: | 1110004K02Rik |
| Gene Description: | coiled-coil domain containing 117 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
