Difference between revisions of "TSS:Mm 100842.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK211020:0 ENSMUST00000140922.1:-7 AK166495:-7 ENSMUST00000093362.11:-11 AK033577:-11 NM_178623:-37 uc007hwu.1:-37 uc007hwx.1:-37 |chr=chr11 |cpg_percen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |9130001I21Rik= | ||
| + | |AW060359= | ||
| + | |Urg4= | ||
|all_trans=AK211020:0 ENSMUST00000140922.1:-7 AK166495:-7 ENSMUST00000093362.11:-11 AK033577:-11 NM_178623:-37 uc007hwu.1:-37 uc007hwx.1:-37 | |all_trans=AK211020:0 ENSMUST00000140922.1:-7 AK166495:-7 ENSMUST00000093362.11:-11 AK033577:-11 NM_178623:-37 uc007hwu.1:-37 uc007hwx.1:-37 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=48 | |distance_to_tss=48 | ||
|end=5741139 | |end=5741139 | ||
| + | |end_of_center_position=5741129 | ||
|entrez_id=72046 | |entrez_id=72046 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
| − | |gene_alias=2010005J08Rik | + | |gene_alias=2010005J08Rik |
|gene_description=upregulator of cell proliferation | |gene_description=upregulator of cell proliferation | ||
|gene_id=72046 | |gene_id=72046 | ||
| Line 17: | Line 21: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1919296 | |hgnc_mgi_id=MGI:1919296 | ||
| + | |mKIAA1507= | ||
|nearest_ensembl=ENSMUSG00000049680 | |nearest_ensembl=ENSMUSG00000049680 | ||
|nearest_promoter_id=NM_178623 | |nearest_promoter_id=NM_178623 | ||
| Line 24: | Line 29: | ||
|species=mouse | |species=mouse | ||
|start=5741117 | |start=5741117 | ||
| + | |start_of_center_position=5741128 | ||
|strand=- | |strand=- | ||
|transcript_name=AK211020 | |transcript_name=AK211020 | ||
Revision as of 20:48, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 5741128 |
|---|---|
| End of the center position in the TSS region: | 5741129 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK211020 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | AK211020:0 ENSMUST00000140922.1:-7 AK166495:-7 ENSMUST00000093362.11:-11 AK033577:-11 NM_178623:-37 uc007hwu.1:-37 uc007hwx.1:-37 |
TATA-Box annotation
| Distance to TSS: | 48 |
|---|---|
| Nearest PromoterID: | NM_178623 |
| Entrez ID: | 72046 |
| Nearest Unigene: | Mm.271657 |
| Nearest Refseq: | NM_178623 |
| Nearest Ensembl: | ENSMUSG00000049680 |
| Gene Name: | upregulator of cell proliferation |
| Gene Alias: | 2010005J08Rik |
| Gene Description: | upregulator of cell proliferation |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
