Difference between revisions of "TSS:Mm 100844.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK129378:-36 AK191392:76 BC066994:-204 ENSMUST00000120306.7:-318 AK035580:-318 ENSMUST00000170116.7:-323 ENSMUST00000053427.10:-323 ENSMUST00000118076.7...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |2210015D19Rik= | ||
| + | |AI596465= | ||
|all_trans=AK129378:-36 AK191392:76 BC066994:-204 ENSMUST00000120306.7:-318 AK035580:-318 ENSMUST00000170116.7:-323 ENSMUST00000053427.10:-323 ENSMUST00000118076.7:-323 NM_001077661:-323 uc007hwv.1:-323 uc011xre.1:-323 uc007hww.1:-323 AK041953:-323 AK037923:-337 uc056yjm.1:-345 AK053862:-345 | |all_trans=AK129378:-36 AK191392:76 BC066994:-204 ENSMUST00000120306.7:-318 AK035580:-318 ENSMUST00000170116.7:-323 ENSMUST00000053427.10:-323 ENSMUST00000118076.7:-323 NM_001077661:-323 uc007hwv.1:-323 uc011xre.1:-323 uc007hww.1:-323 AK041953:-323 AK037923:-337 uc056yjm.1:-345 AK053862:-345 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-101 | |distance_to_tss=-101 | ||
|end=5762053 | |end=5762053 | ||
| + | |end_of_center_position=5762049 | ||
|entrez_id=76508 | |entrez_id=76508 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=1600028I17Rik | + | |gene_alias=1600028I17Rik |
|gene_description="ubiquitin-conjugating enzyme E2D, pseudogene" | |gene_description="ubiquitin-conjugating enzyme E2D, pseudogene" | ||
|gene_id=72046 | |gene_id=72046 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=5762044 | |start=5762044 | ||
| + | |start_of_center_position=5762048 | ||
|strand=- | |strand=- | ||
|transcript_name=AK129378 | |transcript_name=AK129378 | ||
Revision as of 20:48, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5762048 |
|---|---|
| End of the center position in the TSS region: | 5762049 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK129378 |
|---|---|
| Distance: | -36 |
| Num_trans: | 16 |
| All_trans: | AK129378:-36 AK191392:76 BC066994:-204 ENSMUST00000120306.7:-318 AK035580:-318 ENSMUST00000170116.7:-323 ENSMUST00000053427.10:-323 ENSMUST00000118076.7:-323 NM_001077661:-323 uc007hwv.1:-323 uc011xre.1:-323 uc007hww.1:-323 AK041953:-323 AK037923:-337 uc056yjm.1:-345 AK053862:-345 |
TATA-Box annotation
| Distance to TSS: | -101 |
|---|---|
| Nearest PromoterID: | NR_015577 |
| Entrez ID: | 76508 |
| Nearest Unigene: | Mm.260203 |
| Nearest Refseq: | NR_015577 |
| Nearest Ensembl: | ENSMUSG00000083844 |
| Gene Name: | upregulator of cell proliferation |
| Gene Alias: | 1600028I17Rik |
| Gene Description: | "ubiquitin-conjugating enzyme E2D, pseudogene" |
| Gene Type: | ncRNA |
| CpG%: | 0.115 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
