Difference between revisions of "TSS:Mm 100845.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000170116.7:0 ENSMUST00000053427.10:0 ENSMUST00000120306.7:0 ENSMUST00000118076.7:0 NM_001077661:0 uc007hwv.1:0 uc011xre.1:0 uc007hww.1:0 uc056...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |9130001I21Rik= | ||
| + | |AW060359= | ||
| + | |Urg4= | ||
|all_trans=ENSMUST00000170116.7:0 ENSMUST00000053427.10:0 ENSMUST00000120306.7:0 ENSMUST00000118076.7:0 NM_001077661:0 uc007hwv.1:0 uc011xre.1:0 uc007hww.1:0 uc056yjm.1:0 AK035580:0 AK041953:0 AK037923:0 AK053862:0 BC066994:102 AK129378:270 AK191392:390 | |all_trans=ENSMUST00000170116.7:0 ENSMUST00000053427.10:0 ENSMUST00000120306.7:0 ENSMUST00000118076.7:0 NM_001077661:0 uc007hwv.1:0 uc011xre.1:0 uc007hww.1:0 uc056yjm.1:0 AK035580:0 AK041953:0 AK037923:0 AK053862:0 BC066994:102 AK129378:270 AK191392:390 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-5 | |distance_to_tss=-5 | ||
|end=5762404 | |end=5762404 | ||
| + | |end_of_center_position=5762382 | ||
|entrez_id=72046 | |entrez_id=72046 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=2010005J08Rik | + | |gene_alias=2010005J08Rik |
|gene_description=upregulator of cell proliferation | |gene_description=upregulator of cell proliferation | ||
|gene_id=72046 | |gene_id=72046 | ||
| Line 17: | Line 21: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1919296 | |hgnc_mgi_id=MGI:1919296 | ||
| + | |mKIAA1507= | ||
|nearest_ensembl=ENSMUSG00000049680 | |nearest_ensembl=ENSMUSG00000049680 | ||
|nearest_promoter_id=NM_001077661 | |nearest_promoter_id=NM_001077661 | ||
| Line 24: | Line 29: | ||
|species=mouse | |species=mouse | ||
|start=5762358 | |start=5762358 | ||
| + | |start_of_center_position=5762381 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000170116.7 ENSMUST00000053427.10 ENSMUST00000120306.7 ENSMUST00000118076.7 NM_001077661 uc007hwv.1 uc011xre.1 uc007hww.1 uc056yjm.1 AK035580 AK041953 AK037923 AK053862 | |transcript_name=ENSMUST00000170116.7 ENSMUST00000053427.10 ENSMUST00000120306.7 ENSMUST00000118076.7 NM_001077661 uc007hwv.1 uc011xre.1 uc007hww.1 uc056yjm.1 AK035580 AK041953 AK037923 AK053862 | ||
Revision as of 20:48, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5762381 |
|---|---|
| End of the center position in the TSS region: | 5762382 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000170116.7 ENSMUST00000053427.10 ENSMUST00000120306.7 ENSMUST00000118076.7 NM_001077661 uc007hwv.1 uc011xre.1 uc007hww.1 uc056yjm.1 AK035580 AK041953 AK037923 AK053862 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENSMUST00000170116.7:0 ENSMUST00000053427.10:0 ENSMUST00000120306.7:0 ENSMUST00000118076.7:0 NM_001077661:0 uc007hwv.1:0 uc011xre.1:0 uc007hww.1:0 uc056yjm.1:0 AK035580:0 AK041953:0 AK037923:0 AK053862:0 BC066994:102 AK129378:270 AK191392:390 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NM_001077661 |
| Entrez ID: | 72046 |
| Nearest Unigene: | Mm.271657 |
| Nearest Refseq: | NM_178623 |
| Nearest Ensembl: | ENSMUSG00000049680 |
| Gene Name: | upregulator of cell proliferation |
| Gene Alias: | 2010005J08Rik |
| Gene Description: | upregulator of cell proliferation |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
