Difference between revisions of "TSS:Mm 100853.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |B230309I03Rik= | ||
| + | |Tdt-N= | ||
|all_trans=ENSMUST00000124564.1:-16 AJ251804:-24 AK137747:-43 ENSMUST00000109837.7:-53 AF176098:-53 ENSMUST00000153987.1:-57 BC056213:-58 AK183362:148 BC056996:-232 ENSMUST00000020767.3:-280 NM_017401:-280 uc007hxf.2:-280 uc011xrf.1:-280 | |all_trans=ENSMUST00000124564.1:-16 AJ251804:-24 AK137747:-43 ENSMUST00000109837.7:-53 AF176098:-53 ENSMUST00000153987.1:-57 BC056213:-58 AK183362:148 BC056996:-232 ENSMUST00000020767.3:-280 NM_017401:-280 uc007hxf.2:-280 uc011xrf.1:-280 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=284 | |distance_to_tss=284 | ||
|end=5837736 | |end=5837736 | ||
| + | |end_of_center_position=5837732 | ||
|entrez_id=54125 | |entrez_id=54125 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=AI462166 | + | |gene_alias=AI462166 |
|gene_description="polymerase (DNA directed), mu" | |gene_description="polymerase (DNA directed), mu" | ||
|gene_id=54125 | |gene_id=54125 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=5837727 | |start=5837727 | ||
| + | |start_of_center_position=5837731 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000124564.1 | |transcript_name=ENSMUST00000124564.1 | ||
Revision as of 20:50, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 5837731 |
|---|---|
| End of the center position in the TSS region: | 5837732 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000124564.1 |
|---|---|
| Distance: | -16 |
| Num_trans: | 13 |
| All_trans: | ENSMUST00000124564.1:-16 AJ251804:-24 AK137747:-43 ENSMUST00000109837.7:-53 AF176098:-53 ENSMUST00000153987.1:-57 BC056213:-58 AK183362:148 BC056996:-232 ENSMUST00000020767.3:-280 NM_017401:-280 uc007hxf.2:-280 uc011xrf.1:-280 |
TATA-Box annotation
| Distance to TSS: | 284 |
|---|---|
| Nearest PromoterID: | NM_017401 |
| Entrez ID: | 54125 |
| Nearest Unigene: | Mm.260194 |
| Nearest Refseq: | NM_017401 |
| Nearest Ensembl: | ENSMUSG00000020474 |
| Gene Name: | "polymerase (DNA directed), mu" |
| Gene Alias: | AI462166 |
| Gene Description: | "polymerase (DNA directed), mu" |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
