Difference between revisions of "TSS:Mm 100855.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000109837.7:0 ENSMUST00000153987.1:0 AF176098:0 BC056213:0 AK137747:0 AJ251804:1 ENSMUST00000124564.1:9 BC056996:-133 ENSMUST00000020767.3:-181...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |B230309I03Rik= | ||
| + | |Tdt-N= | ||
|all_trans=ENSMUST00000109837.7:0 ENSMUST00000153987.1:0 AF176098:0 BC056213:0 AK137747:0 AJ251804:1 ENSMUST00000124564.1:9 BC056996:-133 ENSMUST00000020767.3:-181 NM_017401:-181 uc007hxf.2:-181 uc011xrf.1:-181 AK183362:181 | |all_trans=ENSMUST00000109837.7:0 ENSMUST00000153987.1:0 AF176098:0 BC056213:0 AK137747:0 AJ251804:1 ENSMUST00000124564.1:9 BC056996:-133 ENSMUST00000020767.3:-181 NM_017401:-181 uc007hxf.2:-181 uc011xrf.1:-181 AK183362:181 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=218 | |distance_to_tss=218 | ||
|end=5837835 | |end=5837835 | ||
| + | |end_of_center_position=5837798 | ||
|entrez_id=54125 | |entrez_id=54125 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=AI462166 | + | |gene_alias=AI462166 |
|gene_description="polymerase (DNA directed), mu" | |gene_description="polymerase (DNA directed), mu" | ||
|gene_id=54125 | |gene_id=54125 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=5837760 | |start=5837760 | ||
| + | |start_of_center_position=5837797 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000109837.7 ENSMUST00000153987.1 AF176098 BC056213 AK137747 | |transcript_name=ENSMUST00000109837.7 ENSMUST00000153987.1 AF176098 BC056213 AK137747 | ||
Revision as of 20:50, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 5837797 |
|---|---|
| End of the center position in the TSS region: | 5837798 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000109837.7 ENSMUST00000153987.1 AF176098 BC056213 AK137747 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENSMUST00000109837.7:0 ENSMUST00000153987.1:0 AF176098:0 BC056213:0 AK137747:0 AJ251804:1 ENSMUST00000124564.1:9 BC056996:-133 ENSMUST00000020767.3:-181 NM_017401:-181 uc007hxf.2:-181 uc011xrf.1:-181 AK183362:181 |
TATA-Box annotation
| Distance to TSS: | 218 |
|---|---|
| Nearest PromoterID: | NM_017401 |
| Entrez ID: | 54125 |
| Nearest Unigene: | Mm.260194 |
| Nearest Refseq: | NM_017401 |
| Nearest Ensembl: | ENSMUSG00000020474 |
| Gene Name: | "polymerase (DNA directed), mu" |
| Gene Alias: | AI462166 |
| Gene Description: | "polymerase (DNA directed), mu" |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
