Difference between revisions of "TSS:Mm 100866.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=S70785:23 BC061100:-237 ENSMUST00000102921.3:-241 NM_022879:-241 uc007hxl.1:-241 AK146716:-241 |chr=chr11 |cpg_percent=0.02 |distance=23 |distance_to_ts...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MLC2a= | ||
| + | |MYL2A= | ||
| + | |Mylc2a= | ||
| + | |RLC-A= | ||
|all_trans=S70785:23 BC061100:-237 ENSMUST00000102921.3:-241 NM_022879:-241 uc007hxl.1:-241 AK146716:-241 | |all_trans=S70785:23 BC061100:-237 ENSMUST00000102921.3:-241 NM_022879:-241 uc007hxl.1:-241 AK146716:-241 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=247 | |distance_to_tss=247 | ||
|end=5898541 | |end=5898541 | ||
| + | |end_of_center_position=5898535 | ||
|entrez_id=17898 | |entrez_id=17898 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| − | |gene_alias=MLC-2alpha | + | |gene_alias=MLC-2alpha |
|gene_description="myosin, light polypeptide 7, regulatory" | |gene_description="myosin, light polypeptide 7, regulatory" | ||
|gene_id=17898 | |gene_id=17898 | ||
| Line 24: | Line 29: | ||
|species=mouse | |species=mouse | ||
|start=5898528 | |start=5898528 | ||
| + | |start_of_center_position=5898534 | ||
|strand=- | |strand=- | ||
|transcript_name=S70785 | |transcript_name=S70785 | ||
Revision as of 20:52, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 5898534 |
|---|---|
| End of the center position in the TSS region: | 5898535 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | S70785 |
|---|---|
| Distance: | 23 |
| Num_trans: | 6 |
| All_trans: | S70785:23 BC061100:-237 ENSMUST00000102921.3:-241 NM_022879:-241 uc007hxl.1:-241 AK146716:-241 |
TATA-Box annotation
| Distance to TSS: | 247 |
|---|---|
| Nearest PromoterID: | NM_022879 |
| Entrez ID: | 17898 |
| Nearest Unigene: | Mm.46514 |
| Nearest Refseq: | NM_022879 |
| Nearest Ensembl: | ENSMUSG00000020469 |
| Gene Name: | "myosin, light polypeptide 7, regulatory" |
| Gene Alias: | MLC-2alpha |
| Gene Description: | "myosin, light polypeptide 7, regulatory" |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
