Difference between revisions of "TSS:Hg 243972.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000423738.4:64 NM_001256155:64 uc031tkc.1:64 KJ904357:-364 |chr=chrX |cpg_percent=0.005 |distance=64 |distance_to_tss=-64 |end=101487980 |entrez_i...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GASP4= | ||
|all_trans=ENST00000423738.4:64 NM_001256155:64 uc031tkc.1:64 KJ904357:-364 | |all_trans=ENST00000423738.4:64 NM_001256155:64 uc031tkc.1:64 KJ904357:-364 | ||
|chr=chrX | |chr=chrX | ||
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|distance_to_tss=-64 | |distance_to_tss=-64 | ||
|end=101487980 | |end=101487980 | ||
| + | |end_of_center_position=49003343 | ||
|entrez_id=100131755 | |entrez_id=100131755 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| − | |gene_alias=CXorf35 | + | |gene_alias=CXorf35 |
|gene_description="armadillo repeat containing, X-linked 4" | |gene_description="armadillo repeat containing, X-linked 4" | ||
|gene_id=100131755 | |gene_id=100131755 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=101487979 | |start=101487979 | ||
| + | |start_of_center_position=49003342 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000423738.4 NM_001256155 uc031tkc.1 | |transcript_name=ENST00000423738.4 NM_001256155 uc031tkc.1 | ||
Revision as of 20:53, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 49003342 |
|---|---|
| End of the center position in the TSS region: | 49003343 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000423738.4 NM_001256155 uc031tkc.1 |
|---|---|
| Distance: | 64 |
| Num_trans: | 4 |
| All_trans: | ENST00000423738.4:64 NM_001256155:64 uc031tkc.1:64 KJ904357:-364 |
TATA-Box annotation
| Distance to TSS: | -64 |
|---|---|
| Nearest PromoterID: | NM_001256155 |
| Entrez ID: | 100131755 |
| Nearest Unigene: | Hs.729062 |
| Nearest Refseq: | NM_152583 |
| Nearest Ensembl: | ENSG00000196440 |
| Gene Name: | "armadillo repeat containing, X-linked 4" |
| Gene Alias: | CXorf35 |
| Gene Description: | "armadillo repeat containing, X-linked 4" |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
