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Difference between revisions of "TSS:Mm 100888.1"

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(Created page with "{{TSSDetail |all_trans=ENSMUST00000109815.8:0 ENSMUST00000109812.8:0 ENSMUST00000093355.11:0 ENSMUST00000066431.13:0 ENSMUST00000019133.10:0 ENSMUST00000101586.2:0 X63615:0 BC...")
 
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|distance_to_tss=161
 
|distance_to_tss=161
 
|end=6065635
 
|end=6065635
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|end_of_center_position=6065588
 
|entrez_id=12323
 
|entrez_id=12323
 
|gc_percent=0.78607
 
|gc_percent=0.78607
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|species=mouse
 
|species=mouse
 
|start=6065539
 
|start=6065539
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|start_of_center_position=6065587
 
|strand=-
 
|strand=-
 
|transcript_name=ENSMUST00000109815.8 ENSMUST00000109812.8 ENSMUST00000093355.11 ENSMUST00000066431.13 ENSMUST00000019133.10 ENSMUST00000101586.2 X63615 BC080273 AK163698 BC024803
 
|transcript_name=ENSMUST00000109815.8 ENSMUST00000109812.8 ENSMUST00000093355.11 ENSMUST00000066431.13 ENSMUST00000019133.10 ENSMUST00000101586.2 X63615 BC080273 AK163698 BC024803

Revision as of 20:54, 11 May 2019

Basic information about the TSS

TSS ID:mm_100888.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:6065539
End:6065635
Strand:-
TSS Score:1
Start of the center position in the TSS region:6065587
End of the center position in the TSS region:6065588



Gene and protein annotation

Transcript_name:ENSMUST00000109815.8 ENSMUST00000109812.8 ENSMUST00000093355.11 ENSMUST00000066431.13 ENSMUST00000019133.10 ENSMUST00000101586.2 X63615 BC080273 AK163698 BC024803
Distance:0
GeneID:12323
HGNC/MGI_ID:MGI:88257
UniProt_ID:P28652 Q5SVI0 Q5SVI1 Q5SVI2 Q5SVI9 Q5SVJ0
Gene_name:"calcium/calmodulin-dependent protein kinase II, beta"
Gene_symbol:Camk2b
Gene_synonyms:CaMK_II
Gene_source:MGI:88257



Transcript annotation

Transcript_name:ENSMUST00000109815.8 ENSMUST00000109812.8 ENSMUST00000093355.11 ENSMUST00000066431.13 ENSMUST00000019133.10 ENSMUST00000101586.2 X63615 BC080273 AK163698 BC024803
Distance:0
Num_trans:24
All_trans:ENSMUST00000109815.8:0 ENSMUST00000109812.8:0 ENSMUST00000093355.11:0 ENSMUST00000066431.13:0 ENSMUST00000019133.10:0 ENSMUST00000101586.2:0 X63615:0 BC080273:0 AK163698:0 BC024803:0 ENSMUST00000101585.9:2 ENSMUST00000154197.7:2 ENSMUST00000129098.1:-23 AK048845:-23 ENSMUST00000002817.11:-107 ENSMUST00000109813.8:-113 ENSMUST00000090443.9:-113 NM_007595:-113 NM_001174054:-113 NM_001174053:-113 uc007hxs.2:-113 uc007hxr.2:-113 uc007hxt.2:-113 AK046454:-113



TATA-Box annotation

Distance to TSS:161
Nearest PromoterID:NM_001174054
Entrez ID:12323
Nearest Unigene:Mm.439733
Nearest Refseq:NM_007595
Nearest Ensembl:ENSMUSG00000057897
Gene Name:"calcium/calmodulin-dependent protein kinase II, beta"
Gene Alias:CaMKII
Gene Description:"calcium/calmodulin-dependent protein kinase II, beta"
Gene Type:protein-coding
CpG%:0.185
GC%:0.78607
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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