Difference between revisions of "TSS:Mm 100890.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000129098.1:14 AK048845:14 ENSMUST00000002817.11:-54 ENSMUST00000109813.8:-60 ENSMUST00000090443.9:-60 ENSMUST00000019133.10:60 NM_007595:-60 N...") |
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|distance_to_tss=68 | |distance_to_tss=68 | ||
|end=6065688 | |end=6065688 | ||
| + | |end_of_center_position=6065680 | ||
|entrez_id=12323 | |entrez_id=12323 | ||
|gc_percent=0.830846 | |gc_percent=0.830846 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=6065671 | |start=6065671 | ||
| + | |start_of_center_position=6065679 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000129098.1 AK048845 | |transcript_name=ENSMUST00000129098.1 AK048845 | ||
Revision as of 20:54, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 6065679 |
|---|---|
| End of the center position in the TSS region: | 6065680 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000129098.1 AK048845 |
|---|---|
| Distance: | 14 |
| Num_trans: | 24 |
| All_trans: | ENSMUST00000129098.1:14 AK048845:14 ENSMUST00000002817.11:-54 ENSMUST00000109813.8:-60 ENSMUST00000090443.9:-60 ENSMUST00000019133.10:60 NM_007595:-60 NM_001174054:-60 NM_001174053:-60 uc007hxs.2:-60 uc007hxr.2:-60 uc007hxt.2:-60 AK046454:-60 ENSMUST00000093355.11:90 ENSMUST00000101586.2:102 AK163698:108 ENSMUST00000109815.8:109 ENSMUST00000109812.8:109 X63615:109 BC024803:109 BC080273:122 ENSMUST00000066431.13:127 ENSMUST00000101585.9:134 ENSMUST00000154197.7:134 |
TATA-Box annotation
| Distance to TSS: | 68 |
|---|---|
| Nearest PromoterID: | NM_001174054 |
| Entrez ID: | 12323 |
| Nearest Unigene: | Mm.439733 |
| Nearest Refseq: | NM_007595 |
| Nearest Ensembl: | ENSMUSG00000057897 |
| Gene Name: | "calcium/calmodulin-dependent protein kinase II, beta" |
| Gene Alias: | CaMKII |
| Gene Description: | "calcium/calmodulin-dependent protein kinase II, beta" |
| Gene Type: | protein-coding |
| CpG%: | 0.21 |
| GC%: | 0.830846 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
