Difference between revisions of "TSS:Mm 100891.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000002817.11:-14 ENSMUST00000109813.8:-20 ENSMUST00000090443.9:-20 NM_007595:-20 NM_001174054:-20 NM_001174053:-20 uc007hxs.2:-20 uc007hxr.2:-2...") |
|||
| Line 6: | Line 6: | ||
|distance_to_tss=35 | |distance_to_tss=35 | ||
|end=6065728 | |end=6065728 | ||
| + | |end_of_center_position=6065713 | ||
|entrez_id=12323 | |entrez_id=12323 | ||
|gc_percent=0.840796 | |gc_percent=0.840796 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=6065697 | |start=6065697 | ||
| + | |start_of_center_position=6065712 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000002817.11 | |transcript_name=ENSMUST00000002817.11 | ||
Revision as of 20:54, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6065712 |
|---|---|
| End of the center position in the TSS region: | 6065713 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000002817.11 |
|---|---|
| Distance: | -14 |
| Num_trans: | 24 |
| All_trans: | ENSMUST00000002817.11:-14 ENSMUST00000109813.8:-20 ENSMUST00000090443.9:-20 NM_007595:-20 NM_001174054:-20 NM_001174053:-20 uc007hxs.2:-20 uc007hxr.2:-20 uc007hxt.2:-20 AK046454:-20 ENSMUST00000129098.1:40 AK048845:40 ENSMUST00000019133.10:86 ENSMUST00000093355.11:116 ENSMUST00000101586.2:128 AK163698:134 ENSMUST00000109815.8:135 ENSMUST00000109812.8:135 X63615:135 BC024803:135 BC080273:148 ENSMUST00000066431.13:153 ENSMUST00000101585.9:160 ENSMUST00000154197.7:160 |
TATA-Box annotation
| Distance to TSS: | 35 |
|---|---|
| Nearest PromoterID: | NM_001174054 |
| Entrez ID: | 12323 |
| Nearest Unigene: | Mm.439733 |
| Nearest Refseq: | NM_007595 |
| Nearest Ensembl: | ENSMUSG00000057897 |
| Gene Name: | "calcium/calmodulin-dependent protein kinase II, beta" |
| Gene Alias: | CaMKII |
| Gene Description: | "calcium/calmodulin-dependent protein kinase II, beta" |
| Gene Type: | protein-coding |
| CpG%: | 0.215 |
| GC%: | 0.840796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
