Personal tools

Difference between revisions of "TSS:Mm 100897.1"

From referenceTSS

Jump to: navigation, search
(Created page with "{{TSSDetail |all_trans=ENSMUST00000123391.7:0 |chr=chr11 |cpg_percent=0.025 |distance=0 |distance_to_tss=-612 |end=6066365 |entrez_id=12323 |gc_percent=0.542289 |gene_alias=Ca...")
 
Line 6: Line 6:
 
|distance_to_tss=-612
 
|distance_to_tss=-612
 
|end=6066365
 
|end=6066365
 +
|end_of_center_position=6066360
 
|entrez_id=12323
 
|entrez_id=12323
 
|gc_percent=0.542289
 
|gc_percent=0.542289
Line 24: Line 25:
 
|species=mouse
 
|species=mouse
 
|start=6066354
 
|start=6066354
 +
|start_of_center_position=6066359
 
|strand=-
 
|strand=-
 
|transcript_name=ENSMUST00000123391.7
 
|transcript_name=ENSMUST00000123391.7

Revision as of 20:54, 11 May 2019

Basic information about the TSS


TSS ID:mm_100897.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:6066354
End:6066365
Strand:-
TSS Score:1
Start of the center position in the TSS region:6066359
End of the center position in the TSS region:6066360



Gene and protein annotation


Transcript_name:ENSMUST00000123391.7
Distance:0
GeneID:12323
HGNC/MGI_ID:MGI:88257
UniProt_ID:
Gene_name:"calcium/calmodulin-dependent protein kinase II, beta"
Gene_symbol:Camk2b
Gene_synonyms:CaMK_II
Gene_source:MGI:88257



Transcript annotation


Transcript_name:ENSMUST00000123391.7
Distance:0
Num_trans:1
All_trans:ENSMUST00000123391.7:0



TATA-Box annotation


Distance to TSS:-612
Nearest PromoterID:NM_007595
Entrez ID:12323
Nearest Unigene:Mm.439733
Nearest Refseq:NM_007595
Nearest Ensembl:ENSMUSG00000057897
Gene Name:"calcium/calmodulin-dependent protein kinase II, beta"
Gene Alias:CaMKII
Gene Description:"calcium/calmodulin-dependent protein kinase II, beta"
Gene Type:protein-coding
CpG%:0.025
GC%:0.542289
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):