Difference between revisions of "TSS:Mm 100901.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000117476.1:29 NR_029471:-265 uc011xrh.1:-265 |chr=chr11 |cpg_percent=0.025 |distance=29 |distance_to_tss=266 |end=6173066 |entrez_id=100042173...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |OTTMUSG00000005107= | ||
|all_trans=ENSMUST00000117476.1:29 NR_029471:-265 uc011xrh.1:-265 | |all_trans=ENSMUST00000117476.1:29 NR_029471:-265 uc011xrh.1:-265 | ||
|chr=chr11 | |chr=chr11 | ||
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|distance_to_tss=266 | |distance_to_tss=266 | ||
|end=6173066 | |end=6173066 | ||
| + | |end_of_center_position=6173066 | ||
|entrez_id=100042173 | |entrez_id=100042173 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias=Gm11968 | + | |gene_alias=Gm11968 |
|gene_description="ribosomal protein S15A, pseudogene 6" | |gene_description="ribosomal protein S15A, pseudogene 6" | ||
|gene_id= | |gene_id= | ||
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|species=mouse | |species=mouse | ||
|start=6173064 | |start=6173064 | ||
| + | |start_of_center_position=6173065 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000117476.1 | |transcript_name=ENSMUST00000117476.1 | ||
Revision as of 20:55, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 6173065 |
|---|---|
| End of the center position in the TSS region: | 6173066 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000117476.1 |
|---|---|
| Distance: | 29 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000117476.1:29 NR_029471:-265 uc011xrh.1:-265 |
TATA-Box annotation
| Distance to TSS: | 266 |
|---|---|
| Nearest PromoterID: | NR_029471 |
| Entrez ID: | 100042173 |
| Nearest Unigene: | Mm.441799 |
| Nearest Refseq: | NR_029471 |
| Nearest Ensembl: | |
| Gene Name: | "ribosomal protein S15A, pseudogene 6" |
| Gene Alias: | Gm11968 |
| Gene Description: | "ribosomal protein S15A, pseudogene 6" |
| Gene Type: | pseudo |
| CpG%: | 0.025 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
