Difference between revisions of "TSS:Mm 100906.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.005 |distance= |distance_to_tss=-13443 |end=6213914 |entrez_id=209586 |gc_percent=0.427861 |gene_alias=AI427847|BC024322|mKIAA1068 |gene_...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |BC024322= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 5: | Line 6: | ||
|distance_to_tss=-13443 | |distance_to_tss=-13443 | ||
|end=6213914 | |end=6213914 | ||
| + | |end_of_center_position=6213894 | ||
|entrez_id=209586 | |entrez_id=209586 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
| − | |gene_alias=AI427847 | + | |gene_alias=AI427847 |
|gene_description=NudC domain containing 3 | |gene_description=NudC domain containing 3 | ||
|gene_name=Nudcd3 | |gene_name=Nudcd3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |mKIAA1068= | ||
|nearest_ensembl=ENSMUSG00000053838 | |nearest_ensembl=ENSMUSG00000053838 | ||
|nearest_promoter_id=NM_173748 | |nearest_promoter_id=NM_173748 | ||
| Line 18: | Line 21: | ||
|species=mouse | |species=mouse | ||
|start=6213873 | |start=6213873 | ||
| + | |start_of_center_position=6213893 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Revision as of 20:55, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 6213893 |
|---|---|
| End of the center position in the TSS region: | 6213894 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -13443 |
|---|---|
| Nearest PromoterID: | NM_173748 |
| Entrez ID: | 209586 |
| Nearest Unigene: | Mm.25321 |
| Nearest Refseq: | NM_173748 |
| Nearest Ensembl: | ENSMUSG00000053838 |
| Gene Name: | Nudcd3 |
| Gene Alias: | AI427847 |
| Gene Description: | NudC domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
