Difference between revisions of "TSS:Mm 100907.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.035 |distance= |distance_to_tss=7984 |end=6222283 |entrez_id=237636 |gc_percent=0.522388 |gene_alias=9130221N23Rik|Gm243 |gene_descriptio...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |Gm243= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 5: | Line 6: | ||
|distance_to_tss=7984 | |distance_to_tss=7984 | ||
|end=6222283 | |end=6222283 | ||
| + | |end_of_center_position=6222262 | ||
|entrez_id=237636 | |entrez_id=237636 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=9130221N23Rik | + | |gene_alias=9130221N23Rik |
|gene_description=NPC1-like 1 | |gene_description=NPC1-like 1 | ||
|gene_name=Npc1l1 | |gene_name=Npc1l1 | ||
| Line 18: | Line 20: | ||
|species=mouse | |species=mouse | ||
|start=6222239 | |start=6222239 | ||
| + | |start_of_center_position=6222261 | ||
|strand=- | |strand=- | ||
|tata_box="7(GCTTTTCAAGCC,+,0.00)" | |tata_box="7(GCTTTTCAAGCC,+,0.00)" | ||
Revision as of 20:55, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 6222261 |
|---|---|
| End of the center position in the TSS region: | 6222262 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 7984 |
|---|---|
| Nearest PromoterID: | NM_207242 |
| Entrez ID: | 237636 |
| Nearest Unigene: | Mm.212492 |
| Nearest Refseq: | NM_207242 |
| Nearest Ensembl: | ENSMUSG00000020447 |
| Gene Name: | Npc1l1 |
| Gene Alias: | 9130221N23Rik |
| Gene Description: | NPC1-like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "7(GCTTTTCAAGCC,+,0.00)" |
