Difference between revisions of "TSS:Mm 100911.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000004505.2:0 AK078947:0 AY437866:5 BC131789:5 BC131788:6 NM_207242:-85 uc007hyb.2:-85 |chr=chr11 |cpg_percent=0.01 |distance=0 |distance_to_ts...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Gm243= | ||
|all_trans=ENSMUST00000004505.2:0 AK078947:0 AY437866:5 BC131789:5 BC131788:6 NM_207242:-85 uc007hyb.2:-85 | |all_trans=ENSMUST00000004505.2:0 AK078947:0 AY437866:5 BC131789:5 BC131788:6 NM_207242:-85 uc007hyb.2:-85 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=101 | |distance_to_tss=101 | ||
|end=6230160 | |end=6230160 | ||
| + | |end_of_center_position=6230144 | ||
|entrez_id=237636 | |entrez_id=237636 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=9130221N23Rik | + | |gene_alias=9130221N23Rik |
|gene_description=NPC1-like 1 | |gene_description=NPC1-like 1 | ||
|gene_id=237636 | |gene_id=237636 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=6230127 | |start=6230127 | ||
| + | |start_of_center_position=6230143 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000004505.2 AK078947 | |transcript_name=ENSMUST00000004505.2 AK078947 | ||
Revision as of 20:55, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 6230143 |
|---|---|
| End of the center position in the TSS region: | 6230144 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000004505.2 AK078947 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENSMUST00000004505.2:0 AK078947:0 AY437866:5 BC131789:5 BC131788:6 NM_207242:-85 uc007hyb.2:-85 |
TATA-Box annotation
| Distance to TSS: | 101 |
|---|---|
| Nearest PromoterID: | NM_207242 |
| Entrez ID: | 237636 |
| Nearest Unigene: | Mm.212492 |
| Nearest Refseq: | NM_207242 |
| Nearest Ensembl: | ENSMUSG00000020447 |
| Gene Name: | NPC1-like 1 |
| Gene Alias: | 9130221N23Rik |
| Gene Description: | NPC1-like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
