Difference between revisions of "TSS:Mm 100913.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000155874.1:0 NM_026538:0 uc007hyc.1:0 AK076975:0 AK011136:0 AK076047:0 BC018291:0 AK077514:0 AK159793:0 AK169654:0 AK171962:0 AK145628:-15 ENS...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |D11Ertd619e= | ||
| + | |Noh61= | ||
|all_trans=ENSMUST00000155874.1:0 NM_026538:0 uc007hyc.1:0 AK076975:0 AK011136:0 AK076047:0 BC018291:0 AK077514:0 AK159793:0 AK169654:0 AK171962:0 AK145628:-15 ENSMUST00000004507.10:-17 ENSMUST00000151446.1:-17 uc007hyd.1:140 AK191115:171 AK188357:253 | |all_trans=ENSMUST00000155874.1:0 NM_026538:0 uc007hyc.1:0 AK076975:0 AK011136:0 AK076047:0 BC018291:0 AK077514:0 AK159793:0 AK169654:0 AK171962:0 AK145628:-15 ENSMUST00000004507.10:-17 ENSMUST00000151446.1:-17 uc007hyd.1:140 AK191115:171 AK188357:253 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-8 | |distance_to_tss=-8 | ||
|end=6267755 | |end=6267755 | ||
| + | |end_of_center_position=6267737 | ||
|entrez_id=52513 | |entrez_id=52513 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=2600001H07Rik | + | |gene_alias=2600001H07Rik |
|gene_description=DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 | |gene_description=DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 | ||
|gene_id=52513 | |gene_id=52513 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=6267718 | |start=6267718 | ||
| + | |start_of_center_position=6267736 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000155874.1 NM_026538 uc007hyc.1 AK076975 AK011136 AK076047 BC018291 AK077514 AK159793 AK169654 AK171962 | |transcript_name=ENSMUST00000155874.1 NM_026538 uc007hyc.1 AK076975 AK011136 AK076047 BC018291 AK077514 AK159793 AK169654 AK171962 | ||
Revision as of 20:55, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 6267736 |
|---|---|
| End of the center position in the TSS region: | 6267737 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000155874.1 NM_026538 uc007hyc.1 AK076975 AK011136 AK076047 BC018291 AK077514 AK159793 AK169654 AK171962 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENSMUST00000155874.1:0 NM_026538:0 uc007hyc.1:0 AK076975:0 AK011136:0 AK076047:0 BC018291:0 AK077514:0 AK159793:0 AK169654:0 AK171962:0 AK145628:-15 ENSMUST00000004507.10:-17 ENSMUST00000151446.1:-17 uc007hyd.1:140 AK191115:171 AK188357:253 |
TATA-Box annotation
| Distance to TSS: | -8 |
|---|---|
| Nearest PromoterID: | NM_026538 |
| Entrez ID: | 52513 |
| Nearest Unigene: | Mm.29810 |
| Nearest Refseq: | NM_026538 |
| Nearest Ensembl: | ENSMUSG00000004393 |
| Gene Name: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 |
| Gene Alias: | 2600001H07Rik |
| Gene Description: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
