Difference between revisions of "TSS:Mm 100914.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK213586:10 AK003613:111 AK211429:190 AK218753:190 AK219991:190 AK184055:318 |chr=chr11 |cpg_percent=0.02 |distance=10 |distance_to_tss=3190 |end=627165...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AI326346= | ||
|all_trans=AK213586:10 AK003613:111 AK211429:190 AK218753:190 AK219991:190 AK184055:318 | |all_trans=AK213586:10 AK003613:111 AK211429:190 AK218753:190 AK219991:190 AK184055:318 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=3190 | |distance_to_tss=3190 | ||
|end=6271654 | |end=6271654 | ||
| + | |end_of_center_position=6271648 | ||
|entrez_id=103694 | |entrez_id=103694 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias=1110014L17Rik | + | |gene_alias=1110014L17Rik |
|gene_description=transmembrane p24 trafficking protein 4 | |gene_description=transmembrane p24 trafficking protein 4 | ||
|gene_id=103694 | |gene_id=103694 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=6271640 | |start=6271640 | ||
| + | |start_of_center_position=6271647 | ||
|strand=- | |strand=- | ||
|transcript_name=AK213586 | |transcript_name=AK213586 | ||
Revision as of 20:56, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 6271647 |
|---|---|
| End of the center position in the TSS region: | 6271648 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK213586 |
|---|---|
| Distance: | 10 |
| Num_trans: | 6 |
| All_trans: | AK213586:10 AK003613:111 AK211429:190 AK218753:190 AK219991:190 AK184055:318 |
TATA-Box annotation
| Distance to TSS: | 3190 |
|---|---|
| Nearest PromoterID: | NM_134020 |
| Entrez ID: | 103694 |
| Nearest Unigene: | Mm.254495 |
| Nearest Refseq: | NM_134020 |
| Nearest Ensembl: | ENSMUSG00000004394 |
| Gene Name: | transmembrane emp24 protein transport domain containing 4 |
| Gene Alias: | 1110014L17Rik |
| Gene Description: | transmembrane p24 trafficking protein 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
