Difference between revisions of "TSS:Mm 100923.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK168110:0 BC147293:0 BC147294:0 BC147741:0 BC147751:0 ENSMUST00000109737.8:-4 NM_029938:-4 uc007hyp.2:-4 uc007hyq.2:-4 AK155105:-6 AK021267:20 ENSMUST0...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |H2a.z-2= | ||
| + | |H2av= | ||
|all_trans=AK168110:0 BC147293:0 BC147294:0 BC147741:0 BC147751:0 ENSMUST00000109737.8:-4 NM_029938:-4 uc007hyp.2:-4 uc007hyq.2:-4 AK155105:-6 AK021267:20 ENSMUST00000093346.5:33 BC028539:33 | |all_trans=AK168110:0 BC147293:0 BC147294:0 BC147741:0 BC147751:0 ENSMUST00000109737.8:-4 NM_029938:-4 uc007hyp.2:-4 uc007hyq.2:-4 AK155105:-6 AK021267:20 ENSMUST00000093346.5:33 BC028539:33 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=31 | |distance_to_tss=31 | ||
|end=6444439 | |end=6444439 | ||
| + | |end_of_center_position=6444412 | ||
|entrez_id=77605 | |entrez_id=77605 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=C530002L11Rik | + | |gene_alias=C530002L11Rik |
|gene_description="H2A histone family, member V" | |gene_description="H2A histone family, member V" | ||
|gene_id=77605 | |gene_id=77605 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=6444384 | |start=6444384 | ||
| + | |start_of_center_position=6444411 | ||
|strand=- | |strand=- | ||
|transcript_name=AK168110 BC147293 BC147294 BC147741 BC147751 | |transcript_name=AK168110 BC147293 BC147294 BC147741 BC147751 | ||
Revision as of 21:01, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 6444411 |
|---|---|
| End of the center position in the TSS region: | 6444412 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK168110 BC147293 BC147294 BC147741 BC147751 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | AK168110:0 BC147293:0 BC147294:0 BC147741:0 BC147751:0 ENSMUST00000109737.8:-4 NM_029938:-4 uc007hyp.2:-4 uc007hyq.2:-4 AK155105:-6 AK021267:20 ENSMUST00000093346.5:33 BC028539:33 |
TATA-Box annotation
| Distance to TSS: | 31 |
|---|---|
| Nearest PromoterID: | NM_029938 |
| Entrez ID: | 77605 |
| Nearest Unigene: | Mm.27624 |
| Nearest Refseq: | NM_029938 |
| Nearest Ensembl: | ENSMUSG00000041126 |
| Gene Name: | "H2A histone family, member V" |
| Gene Alias: | C530002L11Rik |
| Gene Description: | "H2A histone family, member V" |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
