Difference between revisions of "TSS:Mm 100926.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000175144.1:-38 |chr=chr11 |cpg_percent=0 |distance=-38 |distance_to_tss=3840 |end=6472239 |entrez_id=19291 |gc_percent=0.348259 |gene_alias=23...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AA114818= | ||
| + | |Cager-2= | ||
| + | |D11Bwg0414e= | ||
|all_trans=ENSMUST00000175144.1:-38 | |all_trans=ENSMUST00000175144.1:-38 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=3840 | |distance_to_tss=3840 | ||
|end=6472239 | |end=6472239 | ||
| + | |end_of_center_position=6472236 | ||
|entrez_id=19291 | |entrez_id=19291 | ||
|gc_percent=0.348259 | |gc_percent=0.348259 | ||
| − | |gene_alias=2310015K15Rik | + | |gene_alias=2310015K15Rik |
|gene_description=purine rich element binding protein B | |gene_description=purine rich element binding protein B | ||
|gene_id= | |gene_id= | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=6472232 | |start=6472232 | ||
| + | |start_of_center_position=6472235 | ||
|strand=- | |strand=- | ||
|tata_box="6(CCATATATGGCA,+,0.00)" | |tata_box="6(CCATATATGGCA,+,0.00)" | ||
Revision as of 21:01, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 6472235 |
|---|---|
| End of the center position in the TSS region: | 6472236 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000175144.1 |
|---|---|
| Distance: | -38 |
| Num_trans: | 1 |
| All_trans: | ENSMUST00000175144.1:-38 |
TATA-Box annotation
| Distance to TSS: | 3840 |
|---|---|
| Nearest PromoterID: | NM_011221 |
| Entrez ID: | 19291 |
| Nearest Unigene: | Mm.296150 |
| Nearest Refseq: | NM_011221 |
| Nearest Ensembl: | ENSMUSG00000094483 |
| Gene Name: | "predicted gene, 22123" |
| Gene Alias: | 2310015K15Rik |
| Gene Description: | purine rich element binding protein B |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.348259 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "6(CCATATATGGCA,+,0.00)" |
