Difference between revisions of "TSS:Mm 100928.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000179343.2:0 AF017630:0 BC156317:0 NM_011221:-159 uc007hyr.3:-159 |chr=chr11 |cpg_percent=0.22 |distance=0 |distance_to_tss=177 |end=6475917 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AA114818= | ||
| + | |Cager-2= | ||
| + | |D11Bwg0414e= | ||
|all_trans=ENSMUST00000179343.2:0 AF017630:0 BC156317:0 NM_011221:-159 uc007hyr.3:-159 | |all_trans=ENSMUST00000179343.2:0 AF017630:0 BC156317:0 NM_011221:-159 uc007hyr.3:-159 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=177 | |distance_to_tss=177 | ||
|end=6475917 | |end=6475917 | ||
| + | |end_of_center_position=6475900 | ||
|entrez_id=19291 | |entrez_id=19291 | ||
|gc_percent=0.870647 | |gc_percent=0.870647 | ||
| − | |gene_alias=2310015K15Rik | + | |gene_alias=2310015K15Rik |
|gene_description=purine rich element binding protein B | |gene_description=purine rich element binding protein B | ||
|gene_id=19291 | |gene_id=19291 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=6475881 | |start=6475881 | ||
| + | |start_of_center_position=6475899 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000179343.2 AF017630 BC156317 | |transcript_name=ENSMUST00000179343.2 AF017630 BC156317 | ||
Revision as of 21:02, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 6475899 |
|---|---|
| End of the center position in the TSS region: | 6475900 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000179343.2 AF017630 BC156317 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | ENSMUST00000179343.2:0 AF017630:0 BC156317:0 NM_011221:-159 uc007hyr.3:-159 |
TATA-Box annotation
| Distance to TSS: | 177 |
|---|---|
| Nearest PromoterID: | NM_011221 |
| Entrez ID: | 19291 |
| Nearest Unigene: | Mm.296150 |
| Nearest Refseq: | NM_011221 |
| Nearest Ensembl: | ENSMUSG00000094483 |
| Gene Name: | purine rich element binding protein B |
| Gene Alias: | 2310015K15Rik |
| Gene Description: | purine rich element binding protein B |
| Gene Type: | protein-coding |
| CpG%: | 0.22 |
| GC%: | 0.870647 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
