Difference between revisions of "TSS:Mm 100940.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000124818.1:-38 AK032971:-341 ENSMUST00000134527.1:-343 ENSMUST00000147762.7:-357 NR_045893:-357 uc029rkn.1:-357 uc007hyu.2:-357 AK160548:-357...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |OTTMUSG00000005115= | ||
|all_trans=ENSMUST00000124818.1:-38 AK032971:-341 ENSMUST00000134527.1:-343 ENSMUST00000147762.7:-357 NR_045893:-357 uc029rkn.1:-357 uc007hyu.2:-357 AK160548:-357 | |all_trans=ENSMUST00000124818.1:-38 AK032971:-341 ENSMUST00000134527.1:-343 ENSMUST00000147762.7:-357 NR_045893:-357 uc029rkn.1:-357 uc007hyu.2:-357 AK160548:-357 | ||
|chr=chr11 | |chr=chr11 | ||
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|distance_to_tss=361 | |distance_to_tss=361 | ||
|end=6528403 | |end=6528403 | ||
| + | |end_of_center_position=6528399 | ||
|entrez_id=100041286 | |entrez_id=100041286 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias=Gm11974 | + | |gene_alias=Gm11974 |
|gene_description=small nucleolar RNA host gene 15 | |gene_description=small nucleolar RNA host gene 15 | ||
|gene_id= | |gene_id= | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=6528394 | |start=6528394 | ||
| + | |start_of_center_position=6528398 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000124818.1 | |transcript_name=ENSMUST00000124818.1 | ||
Revision as of 21:04, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 6528398 |
|---|---|
| End of the center position in the TSS region: | 6528399 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000124818.1 |
|---|---|
| Distance: | -38 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000124818.1:-38 AK032971:-341 ENSMUST00000134527.1:-343 ENSMUST00000147762.7:-357 NR_045893:-357 uc029rkn.1:-357 uc007hyu.2:-357 AK160548:-357 |
TATA-Box annotation
| Distance to TSS: | 361 |
|---|---|
| Nearest PromoterID: | NR_045893 |
| Entrez ID: | 100041286 |
| Nearest Unigene: | Mm.459507 |
| Nearest Refseq: | NR_045893 |
| Nearest Ensembl: | ENSMUSG00000085156 |
| Gene Name: | small nucleolar RNA host gene 15 |
| Gene Alias: | Gm11974 |
| Gene Description: | small nucleolar RNA host gene 15 |
| Gene Type: | ncRNA |
| CpG%: | 0.045 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
