Difference between revisions of "TSS:Mm 100948.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.005 |distance= |distance_to_tss=829 |end=6561023 |entrez_id=216527 |gc_percent=0.41791 |gene_alias=BC029157 |gene_description=cerebral ca...") |
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| Line 5: | Line 5: | ||
|distance_to_tss=829 | |distance_to_tss=829 | ||
|end=6561023 | |end=6561023 | ||
| + | |end_of_center_position=6561012 | ||
|entrez_id=216527 | |entrez_id=216527 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
| Line 18: | Line 19: | ||
|species=mouse | |species=mouse | ||
|start=6561000 | |start=6561000 | ||
| + | |start_of_center_position=6561011 | ||
|strand=- | |strand=- | ||
|tata_box="-81(CCCTCTAAAAAA,-,0.00),7(GCTTAAAGAGCA,+,0.00)" | |tata_box="-81(CCCTCTAAAAAA,-,0.00),7(GCTTAAAGAGCA,+,0.00)" | ||
Revision as of 21:05, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 6561011 |
|---|---|
| End of the center position in the TSS region: | 6561012 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 829 |
|---|---|
| Nearest PromoterID: | NM_001190344 |
| Entrez ID: | 216527 |
| Nearest Unigene: | Mm.221271 |
| Nearest Refseq: | NM_146014 |
| Nearest Ensembl: | ENSMUSG00000000378 |
| Gene Name: | Ccm2 |
| Gene Alias: | BC029157 |
| Gene Description: | cerebral cavernous malformation 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-81(CCCTCTAAAAAA,-,0.00),7(GCTTAAAGAGCA,+,0.00)" |
