Difference between revisions of "TSS:Mm 100953.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK188017:165 |chr=chr11 |cpg_percent=0.05 |distance=165 |distance_to_tss=1820 |end=6624263 |entrez_id=21379 |gc_percent=0.562189 |gene_alias=2310042P22R...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AA120735= | ||
| + | |AA408001= | ||
| + | |AI527316= | ||
| + | |Cpr2= | ||
| + | |R74877= | ||
| + | |Tb-12= | ||
|all_trans=AK188017:165 | |all_trans=AK188017:165 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 12: | ||
|distance_to_tss=1820 | |distance_to_tss=1820 | ||
|end=6624263 | |end=6624263 | ||
| + | |end_of_center_position=6624247 | ||
|entrez_id=21379 | |entrez_id=21379 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| − | |gene_alias=2310042P22Rik | + | |gene_alias=2310042P22Rik |
|gene_description=transforming growth factor beta regulated gene 4 | |gene_description=transforming growth factor beta regulated gene 4 | ||
|gene_id=21379 | |gene_id=21379 | ||
| Line 17: | Line 24: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1100868 | |hgnc_mgi_id=MGI:1100868 | ||
| + | |mKIAA0948= | ||
|nearest_ensembl=ENSMUSG00000000384 | |nearest_ensembl=ENSMUSG00000000384 | ||
|nearest_promoter_id=NM_001130457 | |nearest_promoter_id=NM_001130457 | ||
| Line 24: | Line 32: | ||
|species=mouse | |species=mouse | ||
|start=6624230 | |start=6624230 | ||
| + | |start_of_center_position=6624246 | ||
|strand=- | |strand=- | ||
|transcript_name=AK188017 | |transcript_name=AK188017 | ||
Revision as of 21:06, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6624246 |
|---|---|
| End of the center position in the TSS region: | 6624247 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK188017 |
|---|---|
| Distance: | 165 |
| Num_trans: | 1 |
| All_trans: | AK188017:165 |
TATA-Box annotation
| Distance to TSS: | 1820 |
|---|---|
| Nearest PromoterID: | NM_001130457 |
| Entrez ID: | 21379 |
| Nearest Unigene: | Mm.247761 |
| Nearest Refseq: | NM_134011 |
| Nearest Ensembl: | ENSMUSG00000000384 |
| Gene Name: | transforming growth factor beta regulated gene 4 |
| Gene Alias: | 2310042P22Rik |
| Gene Description: | transforming growth factor beta regulated gene 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
