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Difference between revisions of "TSS:Mm 100955.1"

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(Created page with "{{TSSDetail |all_trans=ENSMUST00000131815.7:-200 BC016483:-201 BC031155:-204 AK129245:-204 BC031910:-215 ENSMUST00000156969.7:-221 ENSMUST00000000394.13:-221 ENSMUST0000015069...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|AA120735=
 +
|AA408001=
 +
|AI527316=
 +
|Cpr2=
 +
|R74877=
 +
|Tb-12=
 
|all_trans=ENSMUST00000131815.7:-200 BC016483:-201 BC031155:-204 AK129245:-204 BC031910:-215 ENSMUST00000156969.7:-221 ENSMUST00000000394.13:-221 ENSMUST00000150697.7:-221 AK028966:-221 AK168088:-242 AK144813:-242 AK166760:-242 ENSMUST00000189268.6:-245 ENSMUST00000136682.7:-245 NM_134011:-245 NM_001130457:-245 uc007hyz.2:-245 uc007hza.2:-245 ENSMUST00000144463.1:347
 
|all_trans=ENSMUST00000131815.7:-200 BC016483:-201 BC031155:-204 AK129245:-204 BC031910:-215 ENSMUST00000156969.7:-221 ENSMUST00000000394.13:-221 ENSMUST00000150697.7:-221 AK028966:-221 AK168088:-242 AK144813:-242 AK166760:-242 ENSMUST00000189268.6:-245 ENSMUST00000136682.7:-245 NM_134011:-245 NM_001130457:-245 uc007hyz.2:-245 uc007hza.2:-245 ENSMUST00000144463.1:347
 
|chr=chr11
 
|chr=chr11
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|distance_to_tss=253
 
|distance_to_tss=253
 
|end=6625822
 
|end=6625822
 +
|end_of_center_position=6625814
 
|entrez_id=21379
 
|entrez_id=21379
 
|gc_percent=0.666667
 
|gc_percent=0.666667
−
|gene_alias=2310042P22Rik|AA120735|AA408001|AI527316|Cpr2|R74877|Tb-12|mKIAA0948
+
|gene_alias=2310042P22Rik
 
|gene_description=transforming growth factor beta regulated gene 4
 
|gene_description=transforming growth factor beta regulated gene 4
 
|gene_id=21379
 
|gene_id=21379
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|gene_type=protein-coding
 
|gene_type=protein-coding
 
|hgnc_mgi_id=MGI:1100868
 
|hgnc_mgi_id=MGI:1100868
 +
|mKIAA0948=
 
|nearest_ensembl=ENSMUSG00000000384
 
|nearest_ensembl=ENSMUSG00000000384
 
|nearest_promoter_id=NM_001130457
 
|nearest_promoter_id=NM_001130457
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|species=mouse
 
|species=mouse
 
|start=6625805
 
|start=6625805
 +
|start_of_center_position=6625813
 
|strand=-
 
|strand=-
 
|transcript_name=ENSMUST00000131815.7
 
|transcript_name=ENSMUST00000131815.7

Revision as of 21:06, 11 May 2019

Basic information about the TSS

TSS ID:mm_100955.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:6625805
End:6625822
Strand:-
TSS Score:1
Start of the center position in the TSS region:6625813
End of the center position in the TSS region:6625814



Gene and protein annotation

Transcript_name:ENSMUST00000131815.7
Distance:-200
GeneID:21379
HGNC/MGI_ID:MGI:1100868
UniProt_ID:
Gene_name:transforming growth factor beta regulated gene 4
Gene_symbol:Tbrg4
Gene_synonyms:2310042P22Rik Cpr2 TB-12
Gene_source:MGI:1100868



Transcript annotation

Transcript_name:ENSMUST00000131815.7
Distance:-200
Num_trans:19
All_trans:ENSMUST00000131815.7:-200 BC016483:-201 BC031155:-204 AK129245:-204 BC031910:-215 ENSMUST00000156969.7:-221 ENSMUST00000000394.13:-221 ENSMUST00000150697.7:-221 AK028966:-221 AK168088:-242 AK144813:-242 AK166760:-242 ENSMUST00000189268.6:-245 ENSMUST00000136682.7:-245 NM_134011:-245 NM_001130457:-245 uc007hyz.2:-245 uc007hza.2:-245 ENSMUST00000144463.1:347



TATA-Box annotation

Distance to TSS:253
Nearest PromoterID:NM_001130457
Entrez ID:21379
Nearest Unigene:Mm.247761
Nearest Refseq:NM_134011
Nearest Ensembl:ENSMUSG00000000384
Gene Name:transforming growth factor beta regulated gene 4
Gene Alias:2310042P22Rik
Gene Description:transforming growth factor beta regulated gene 4
Gene Type:protein-coding
CpG%:0.105
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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