Difference between revisions of "TSS:Mm 100983.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |IGFBP-3= | ||
| + | |IGgfbp3= | ||
|all_trans=AK077477:-10 AK045003:57 AK141690:-91 X81581:-377 ENSMUST00000020702.10:-443 BC031421:-443 BC058261:-452 ENSMUST00000135887.2:-469 NM_008343:-469 uc007hzi.2:-469 | |all_trans=AK077477:-10 AK045003:57 AK141690:-91 X81581:-377 ENSMUST00000020702.10:-443 BC031421:-443 BC058261:-452 ENSMUST00000135887.2:-469 NM_008343:-469 uc007hzi.2:-469 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=476 | |distance_to_tss=476 | ||
|end=7213454 | |end=7213454 | ||
| + | |end_of_center_position=7213448 | ||
|entrez_id=16009 | |entrez_id=16009 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=AI649005 | + | |gene_alias=AI649005 |
|gene_description=insulin-like growth factor binding protein 3 | |gene_description=insulin-like growth factor binding protein 3 | ||
|gene_id=16009 | |gene_id=16009 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=7213440 | |start=7213440 | ||
| + | |start_of_center_position=7213447 | ||
|strand=- | |strand=- | ||
|transcript_name=AK077477 | |transcript_name=AK077477 | ||
Revision as of 21:11, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 7213447 |
|---|---|
| End of the center position in the TSS region: | 7213448 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK077477 |
|---|---|
| Distance: | -10 |
| Num_trans: | 10 |
| All_trans: | AK077477:-10 AK045003:57 AK141690:-91 X81581:-377 ENSMUST00000020702.10:-443 BC031421:-443 BC058261:-452 ENSMUST00000135887.2:-469 NM_008343:-469 uc007hzi.2:-469 |
TATA-Box annotation
| Distance to TSS: | 476 |
|---|---|
| Nearest PromoterID: | NM_008343 |
| Entrez ID: | 16009 |
| Nearest Unigene: | Mm.29254 |
| Nearest Refseq: | NM_008343 |
| Nearest Ensembl: | ENSMUSG00000020427 |
| Gene Name: | insulin-like growth factor binding protein 3 |
| Gene Alias: | AI649005 |
| Gene Description: | insulin-like growth factor binding protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
