Difference between revisions of "TSS:Mm 101062.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC109334:-394 ENSMUST00000102909.7:-480 NM_001290520:-480 NM_177576:-480 uc007hzu.1:-480 uc011xrl.1:-480 AK052771:-480 |chr=chr11 |cpg_percent=0.07 |dis...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-90 | |distance_to_tss=-90 | ||
|end=9048511 | |end=9048511 | ||
| + | |end_of_center_position=9048503 | ||
|entrez_id=626870 | |entrez_id=626870 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=9048493 | |start=9048493 | ||
| + | |start_of_center_position=9048502 | ||
|strand=- | |strand=- | ||
|transcript_name=BC109334 | |transcript_name=BC109334 | ||
Revision as of 21:20, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 9048502 |
|---|---|
| End of the center position in the TSS region: | 9048503 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC109334 |
|---|---|
| Distance: | -394 |
| Num_trans: | 7 |
| All_trans: | BC109334:-394 ENSMUST00000102909.7:-480 NM_001290520:-480 NM_177576:-480 uc007hzu.1:-480 uc011xrl.1:-480 AK052771:-480 |
TATA-Box annotation
| Distance to TSS: | -90 |
|---|---|
| Nearest PromoterID: | NM_001037928 |
| Entrez ID: | 626870 |
| Nearest Unigene: | Mm.369429 |
| Nearest Refseq: | NM_001037928 |
| Nearest Ensembl: | ENSMUSG00000040978 |
| Gene Name: | Sad1 and UNC84 domain containing 3 |
| Gene Alias: | OTTMUSG00000005148 |
| Gene Description: | predicted gene 11992 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
