Difference between revisions of "TSS:Mm 101071.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_015785:18 NM_001185153:18 uc011xrm.1:18 uc007iae.2:18 ENSMUST00000020413.3:29 D17569:29 BC139450:49 BC139453:49 BC145628:49 |chr=chr11 |cpg_percent=0...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Iam38= | ||
| + | |Sp38= | ||
|all_trans=NM_015785:18 NM_001185153:18 uc011xrm.1:18 uc007iae.2:18 ENSMUST00000020413.3:29 D17569:29 BC139450:49 BC139453:49 BC145628:49 | |all_trans=NM_015785:18 NM_001185153:18 uc011xrm.1:18 uc007iae.2:18 ENSMUST00000020413.3:29 D17569:29 BC139450:49 BC139453:49 BC145628:49 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-22 | |distance_to_tss=-22 | ||
|end=11462446 | |end=11462446 | ||
| + | |end_of_center_position=11462442 | ||
|entrez_id=53604 | |entrez_id=53604 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| − | |gene_alias=4930486K01Rik | + | |gene_alias=4930486K01Rik |
|gene_description=zona pellucida binding protein | |gene_description=zona pellucida binding protein | ||
|gene_id=53604 | |gene_id=53604 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=11462436 | |start=11462436 | ||
| + | |start_of_center_position=11462441 | ||
|strand=- | |strand=- | ||
|transcript_name=NM_015785 NM_001185153 uc011xrm.1 uc007iae.2 | |transcript_name=NM_015785 NM_001185153 uc011xrm.1 uc007iae.2 | ||
Revision as of 21:24, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 11462441 |
|---|---|
| End of the center position in the TSS region: | 11462442 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_015785 NM_001185153 uc011xrm.1 uc007iae.2 |
|---|---|
| Distance: | 18 |
| Num_trans: | 9 |
| All_trans: | NM_015785:18 NM_001185153:18 uc011xrm.1:18 uc007iae.2:18 ENSMUST00000020413.3:29 D17569:29 BC139450:49 BC139453:49 BC145628:49 |
TATA-Box annotation
| Distance to TSS: | -22 |
|---|---|
| Nearest PromoterID: | NM_001185153 |
| Entrez ID: | 53604 |
| Nearest Unigene: | Mm.9500 |
| Nearest Refseq: | NM_015785 |
| Nearest Ensembl: | ENSMUSG00000020193 |
| Gene Name: | zona pellucida binding protein |
| Gene Alias: | 4930486K01Rik |
| Gene Description: | zona pellucida binding protein |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
